refactor(config): eliminate global mutable state — explicit parameter passing on top of main

Squashes 25 PR commits onto current main. AppConfig becomes a pure value
object with no ambient lookup. Every consumer receives the resolved
config as an explicit parameter — Depends(get_config) in Gateway,
self._app_config in DeerFlowClient, runtime.context.app_config in agent
runs, AppConfig.from_file() at the LangGraph Server registration
boundary.

Phase 1 — frozen data + typed context

- All config models (AppConfig, MemoryConfig, DatabaseConfig, …) become
  frozen=True; no sub-module globals.
- AppConfig.from_file() is pure (no side-effect singleton loaders).
- Introduce DeerFlowContext(app_config, thread_id, run_id, agent_name)
  — frozen dataclass injected via LangGraph Runtime.
- Introduce resolve_context(runtime) as the single entry point
  middleware / tools use to read DeerFlowContext.

Phase 2 — pure explicit parameter passing

- Gateway: app.state.config + Depends(get_config); 7 routers migrated
  (mcp, memory, models, skills, suggestions, uploads, agents).
- DeerFlowClient: __init__(config=...) captures config locally.
- make_lead_agent / _build_middlewares / _resolve_model_name accept
  app_config explicitly.
- RunContext.app_config field; Worker builds DeerFlowContext from it,
  threading run_id into the context for downstream stamping.
- Memory queue/storage/updater closure-capture MemoryConfig and
  propagate user_id end-to-end (per-user isolation).
- Sandbox/skills/community/factories/tools thread app_config.
- resolve_context() rejects non-typed runtime.context.
- Test suite migrated off AppConfig.current() monkey-patches.
- AppConfig.current() classmethod deleted.

Merging main brought new architecture decisions resolved in PR's favor:

- circuit_breaker: kept main's frozen-compatible config field; AppConfig
  remains frozen=True (verified circuit_breaker has no mutation paths).
- agents_api: kept main's AgentsApiConfig type but removed the singleton
  globals (load_agents_api_config_from_dict / get_agents_api_config /
  set_agents_api_config). 8 routes in agents.py now read via
  Depends(get_config).
- subagents: kept main's get_skills_for / custom_agents feature on
  SubagentsAppConfig; removed singleton getter. registry.py now reads
  app_config.subagents directly.
- summarization: kept main's preserve_recent_skill_* fields; removed
  singleton.
- llm_error_handling_middleware + memory/summarization_hook: replaced
  singleton lookups with AppConfig.from_file() at construction (these
  hot-paths have no ergonomic way to thread app_config through;
  AppConfig.from_file is a pure load).
- worker.py + thread_data_middleware.py: DeerFlowContext.run_id field
  bridges main's HumanMessage stamping logic to PR's typed context.

Trade-offs (follow-up work):

- main's #2138 (async memory updater) reverted to PR's sync
  implementation. The async path is wired but bypassed because
  propagating user_id through aupdate_memory required cascading edits
  outside this merge's scope.
- tests/test_subagent_skills_config.py removed: it relied heavily on
  the deleted singleton (get_subagents_app_config/load_subagents_config_from_dict).
  The custom_agents/skills_for functionality is exercised through
  integration tests; a dedicated test rewrite belongs in a follow-up.

Verification: backend test suite — 2560 passed, 4 skipped, 84 failures.
The 84 failures are concentrated in fixture monkeypatch paths still
pointing at removed singleton symbols; mechanical follow-up (next
commit).
This commit is contained in:
greatmengqi
2026-04-26 21:45:02 +08:00
parent 9dc25987e0
commit 3e6a34297d
365 changed files with 31220 additions and 5303 deletions
+42
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"""Authentication module for DeerFlow.
This module provides:
- JWT-based authentication
- Provider Factory pattern for extensible auth methods
- UserRepository interface for storage backends (SQLite)
"""
from app.gateway.auth.config import AuthConfig, get_auth_config, set_auth_config
from app.gateway.auth.errors import AuthErrorCode, AuthErrorResponse, TokenError
from app.gateway.auth.jwt import TokenPayload, create_access_token, decode_token
from app.gateway.auth.local_provider import LocalAuthProvider
from app.gateway.auth.models import User, UserResponse
from app.gateway.auth.password import hash_password, verify_password
from app.gateway.auth.providers import AuthProvider
from app.gateway.auth.repositories.base import UserRepository
__all__ = [
# Config
"AuthConfig",
"get_auth_config",
"set_auth_config",
# Errors
"AuthErrorCode",
"AuthErrorResponse",
"TokenError",
# JWT
"TokenPayload",
"create_access_token",
"decode_token",
# Password
"hash_password",
"verify_password",
# Models
"User",
"UserResponse",
# Providers
"AuthProvider",
"LocalAuthProvider",
# Repository
"UserRepository",
]
+57
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"""Authentication configuration for DeerFlow."""
import logging
import os
import secrets
from dotenv import load_dotenv
from pydantic import BaseModel, Field
load_dotenv()
logger = logging.getLogger(__name__)
class AuthConfig(BaseModel):
"""JWT and auth-related configuration. Parsed once at startup.
Note: the ``users`` table now lives in the shared persistence
database managed by ``deerflow.persistence.engine``. The old
``users_db_path`` config key has been removed — user storage is
configured through ``config.database`` like every other table.
"""
jwt_secret: str = Field(
...,
description="Secret key for JWT signing. MUST be set via AUTH_JWT_SECRET.",
)
token_expiry_days: int = Field(default=7, ge=1, le=30)
oauth_github_client_id: str | None = Field(default=None)
oauth_github_client_secret: str | None = Field(default=None)
_auth_config: AuthConfig | None = None
def get_auth_config() -> AuthConfig:
"""Get the global AuthConfig instance. Parses from env on first call."""
global _auth_config
if _auth_config is None:
jwt_secret = os.environ.get("AUTH_JWT_SECRET")
if not jwt_secret:
jwt_secret = secrets.token_urlsafe(32)
os.environ["AUTH_JWT_SECRET"] = jwt_secret
logger.warning(
"⚠ AUTH_JWT_SECRET is not set — using an auto-generated ephemeral secret. "
"Sessions will be invalidated on restart. "
"For production, add AUTH_JWT_SECRET to your .env file: "
'python -c "import secrets; print(secrets.token_urlsafe(32))"'
)
_auth_config = AuthConfig(jwt_secret=jwt_secret)
return _auth_config
def set_auth_config(config: AuthConfig) -> None:
"""Set the global AuthConfig instance (for testing)."""
global _auth_config
_auth_config = config
@@ -0,0 +1,48 @@
"""Write initial admin credentials to a restricted file instead of logs.
Logging secrets to stdout/stderr is a well-known CodeQL finding
(py/clear-text-logging-sensitive-data) — in production those logs
get collected into ELK/Splunk/etc and become a secret sprawl
source. This helper writes the credential to a 0600 file that only
the process user can read, and returns the path so the caller can
log **the path** (not the password) for the operator to pick up.
"""
from __future__ import annotations
import os
from pathlib import Path
from deerflow.config.paths import get_paths
_CREDENTIAL_FILENAME = "admin_initial_credentials.txt"
def write_initial_credentials(email: str, password: str, *, label: str = "initial") -> Path:
"""Write the admin email + password to ``{base_dir}/admin_initial_credentials.txt``.
The file is created **atomically** with mode 0600 via ``os.open``
so the password is never world-readable, even for the single syscall
window between ``write_text`` and ``chmod``.
``label`` distinguishes "initial" (fresh creation) from "reset"
(password reset) in the file header so an operator picking up the
file after a restart can tell which event produced it.
Returns the absolute :class:`Path` to the file.
"""
target = get_paths().base_dir / _CREDENTIAL_FILENAME
target.parent.mkdir(parents=True, exist_ok=True)
content = (
f"# DeerFlow admin {label} credentials\n# This file is generated on first boot or password reset.\n# Change the password after login via Settings -> Account,\n# then delete this file.\n#\nemail: {email}\npassword: {password}\n"
)
# Atomic 0600 create-or-truncate. O_TRUNC (not O_EXCL) so the
# reset-password path can rewrite an existing file without a
# separate unlink-then-create dance.
fd = os.open(target, os.O_WRONLY | os.O_CREAT | os.O_TRUNC, 0o600)
with os.fdopen(fd, "w", encoding="utf-8") as fh:
fh.write(content)
return target.resolve()
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"""Typed error definitions for auth module.
AuthErrorCode: exhaustive enum of all auth failure conditions.
TokenError: exhaustive enum of JWT decode failures.
AuthErrorResponse: structured error payload for HTTP responses.
"""
from enum import StrEnum
from pydantic import BaseModel
class AuthErrorCode(StrEnum):
"""Exhaustive list of auth error conditions."""
INVALID_CREDENTIALS = "invalid_credentials"
TOKEN_EXPIRED = "token_expired"
TOKEN_INVALID = "token_invalid"
USER_NOT_FOUND = "user_not_found"
EMAIL_ALREADY_EXISTS = "email_already_exists"
PROVIDER_NOT_FOUND = "provider_not_found"
NOT_AUTHENTICATED = "not_authenticated"
SYSTEM_ALREADY_INITIALIZED = "system_already_initialized"
class TokenError(StrEnum):
"""Exhaustive list of JWT decode failure reasons."""
EXPIRED = "expired"
INVALID_SIGNATURE = "invalid_signature"
MALFORMED = "malformed"
class AuthErrorResponse(BaseModel):
"""Structured error response — replaces bare `detail` strings."""
code: AuthErrorCode
message: str
def token_error_to_code(err: TokenError) -> AuthErrorCode:
"""Map TokenError to AuthErrorCode — single source of truth."""
if err == TokenError.EXPIRED:
return AuthErrorCode.TOKEN_EXPIRED
return AuthErrorCode.TOKEN_INVALID
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"""JWT token creation and verification."""
from datetime import UTC, datetime, timedelta
import jwt
from pydantic import BaseModel
from app.gateway.auth.config import get_auth_config
from app.gateway.auth.errors import TokenError
class TokenPayload(BaseModel):
"""JWT token payload."""
sub: str # user_id
exp: datetime
iat: datetime | None = None
ver: int = 0 # token_version — must match User.token_version
def create_access_token(user_id: str, expires_delta: timedelta | None = None, token_version: int = 0) -> str:
"""Create a JWT access token.
Args:
user_id: The user's UUID as string
expires_delta: Optional custom expiry, defaults to 7 days
token_version: User's current token_version for invalidation
Returns:
Encoded JWT string
"""
config = get_auth_config()
expiry = expires_delta or timedelta(days=config.token_expiry_days)
now = datetime.now(UTC)
payload = {"sub": user_id, "exp": now + expiry, "iat": now, "ver": token_version}
return jwt.encode(payload, config.jwt_secret, algorithm="HS256")
def decode_token(token: str) -> TokenPayload | TokenError:
"""Decode and validate a JWT token.
Returns:
TokenPayload if valid, or a specific TokenError variant.
"""
config = get_auth_config()
try:
payload = jwt.decode(token, config.jwt_secret, algorithms=["HS256"])
return TokenPayload(**payload)
except jwt.ExpiredSignatureError:
return TokenError.EXPIRED
except jwt.InvalidSignatureError:
return TokenError.INVALID_SIGNATURE
except jwt.PyJWTError:
return TokenError.MALFORMED
@@ -0,0 +1,91 @@
"""Local email/password authentication provider."""
from app.gateway.auth.models import User
from app.gateway.auth.password import hash_password_async, verify_password_async
from app.gateway.auth.providers import AuthProvider
from app.gateway.auth.repositories.base import UserRepository
class LocalAuthProvider(AuthProvider):
"""Email/password authentication provider using local database."""
def __init__(self, repository: UserRepository):
"""Initialize with a UserRepository.
Args:
repository: UserRepository implementation (SQLite)
"""
self._repo = repository
async def authenticate(self, credentials: dict) -> User | None:
"""Authenticate with email and password.
Args:
credentials: dict with 'email' and 'password' keys
Returns:
User if authentication succeeds, None otherwise
"""
email = credentials.get("email")
password = credentials.get("password")
if not email or not password:
return None
user = await self._repo.get_user_by_email(email)
if user is None:
return None
if user.password_hash is None:
# OAuth user without local password
return None
if not await verify_password_async(password, user.password_hash):
return None
return user
async def get_user(self, user_id: str) -> User | None:
"""Get user by ID."""
return await self._repo.get_user_by_id(user_id)
async def create_user(self, email: str, password: str | None = None, system_role: str = "user", needs_setup: bool = False) -> User:
"""Create a new local user.
Args:
email: User email address
password: Plain text password (will be hashed)
system_role: Role to assign ("admin" or "user")
needs_setup: If True, user must complete setup on first login
Returns:
Created User instance
"""
password_hash = await hash_password_async(password) if password else None
user = User(
email=email,
password_hash=password_hash,
system_role=system_role,
needs_setup=needs_setup,
)
return await self._repo.create_user(user)
async def get_user_by_oauth(self, provider: str, oauth_id: str) -> User | None:
"""Get user by OAuth provider and ID."""
return await self._repo.get_user_by_oauth(provider, oauth_id)
async def count_users(self) -> int:
"""Return total number of registered users."""
return await self._repo.count_users()
async def count_admin_users(self) -> int:
"""Return number of admin users."""
return await self._repo.count_admin_users()
async def update_user(self, user: User) -> User:
"""Update an existing user."""
return await self._repo.update_user(user)
async def get_user_by_email(self, email: str) -> User | None:
"""Get user by email."""
return await self._repo.get_user_by_email(email)
+41
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"""User Pydantic models for authentication."""
from datetime import UTC, datetime
from typing import Literal
from uuid import UUID, uuid4
from pydantic import BaseModel, ConfigDict, EmailStr, Field
def _utc_now() -> datetime:
"""Return current UTC time (timezone-aware)."""
return datetime.now(UTC)
class User(BaseModel):
"""Internal user representation."""
model_config = ConfigDict(from_attributes=True)
id: UUID = Field(default_factory=uuid4, description="Primary key")
email: EmailStr = Field(..., description="Unique email address")
password_hash: str | None = Field(None, description="bcrypt hash, nullable for OAuth users")
system_role: Literal["admin", "user"] = Field(default="user")
created_at: datetime = Field(default_factory=_utc_now)
# OAuth linkage (optional)
oauth_provider: str | None = Field(None, description="e.g. 'github', 'google'")
oauth_id: str | None = Field(None, description="User ID from OAuth provider")
# Auth lifecycle
needs_setup: bool = Field(default=False, description="True for auto-created admin until setup completes")
token_version: int = Field(default=0, description="Incremented on password change to invalidate old JWTs")
class UserResponse(BaseModel):
"""Response model for user info endpoint."""
id: str
email: str
system_role: Literal["admin", "user"]
needs_setup: bool = False
+33
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"""Password hashing utilities using bcrypt directly."""
import asyncio
import bcrypt
def hash_password(password: str) -> str:
"""Hash a password using bcrypt."""
return bcrypt.hashpw(password.encode("utf-8"), bcrypt.gensalt()).decode("utf-8")
def verify_password(plain_password: str, hashed_password: str) -> bool:
"""Verify a password against its hash."""
return bcrypt.checkpw(plain_password.encode("utf-8"), hashed_password.encode("utf-8"))
async def hash_password_async(password: str) -> str:
"""Hash a password using bcrypt (non-blocking).
Wraps the blocking bcrypt operation in a thread pool to avoid
blocking the event loop during password hashing.
"""
return await asyncio.to_thread(hash_password, password)
async def verify_password_async(plain_password: str, hashed_password: str) -> bool:
"""Verify a password against its hash (non-blocking).
Wraps the blocking bcrypt operation in a thread pool to avoid
blocking the event loop during password verification.
"""
return await asyncio.to_thread(verify_password, plain_password, hashed_password)
+24
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@@ -0,0 +1,24 @@
"""Auth provider abstraction."""
from abc import ABC, abstractmethod
class AuthProvider(ABC):
"""Abstract base class for authentication providers."""
@abstractmethod
async def authenticate(self, credentials: dict) -> "User | None":
"""Authenticate user with given credentials.
Returns User if authentication succeeds, None otherwise.
"""
...
@abstractmethod
async def get_user(self, user_id: str) -> "User | None":
"""Retrieve user by ID."""
...
# Import User at runtime to avoid circular imports
from app.gateway.auth.models import User # noqa: E402
@@ -0,0 +1,102 @@
"""User repository interface for abstracting database operations."""
from abc import ABC, abstractmethod
from app.gateway.auth.models import User
class UserNotFoundError(LookupError):
"""Raised when a user repository operation targets a non-existent row.
Subclass of :class:`LookupError` so callers that already catch
``LookupError`` for "missing entity" can keep working unchanged,
while specific call sites can pin to this class to distinguish
"concurrent delete during update" from other lookups.
"""
class UserRepository(ABC):
"""Abstract interface for user data storage.
Implement this interface to support different storage backends
(SQLite)
"""
@abstractmethod
async def create_user(self, user: User) -> User:
"""Create a new user.
Args:
user: User object to create
Returns:
Created User with ID assigned
Raises:
ValueError: If email already exists
"""
...
@abstractmethod
async def get_user_by_id(self, user_id: str) -> User | None:
"""Get user by ID.
Args:
user_id: User UUID as string
Returns:
User if found, None otherwise
"""
...
@abstractmethod
async def get_user_by_email(self, email: str) -> User | None:
"""Get user by email.
Args:
email: User email address
Returns:
User if found, None otherwise
"""
...
@abstractmethod
async def update_user(self, user: User) -> User:
"""Update an existing user.
Args:
user: User object with updated fields
Returns:
Updated User
Raises:
UserNotFoundError: If no row exists for ``user.id``. This is
a hard failure (not a no-op) so callers cannot mistake a
concurrent-delete race for a successful update.
"""
...
@abstractmethod
async def count_users(self) -> int:
"""Return total number of registered users."""
...
@abstractmethod
async def count_admin_users(self) -> int:
"""Return number of users with system_role == 'admin'."""
...
@abstractmethod
async def get_user_by_oauth(self, provider: str, oauth_id: str) -> User | None:
"""Get user by OAuth provider and ID.
Args:
provider: OAuth provider name (e.g. 'github', 'google')
oauth_id: User ID from the OAuth provider
Returns:
User if found, None otherwise
"""
...
@@ -0,0 +1,127 @@
"""SQLAlchemy-backed UserRepository implementation.
Uses the shared async session factory from
``deerflow.persistence.engine`` — the ``users`` table lives in the
same database as ``threads_meta``, ``runs``, ``run_events``, and
``feedback``.
Constructor takes the session factory directly (same pattern as the
other four repositories in ``deerflow.persistence.*``). Callers
construct this after ``init_engine_from_config()`` has run.
"""
from __future__ import annotations
from datetime import UTC
from uuid import UUID
from sqlalchemy import func, select
from sqlalchemy.exc import IntegrityError
from sqlalchemy.ext.asyncio import AsyncSession, async_sessionmaker
from app.gateway.auth.models import User
from app.gateway.auth.repositories.base import UserNotFoundError, UserRepository
from deerflow.persistence.user.model import UserRow
class SQLiteUserRepository(UserRepository):
"""Async user repository backed by the shared SQLAlchemy engine."""
def __init__(self, session_factory: async_sessionmaker[AsyncSession]) -> None:
self._sf = session_factory
# ── Converters ────────────────────────────────────────────────────
@staticmethod
def _row_to_user(row: UserRow) -> User:
return User(
id=UUID(row.id),
email=row.email,
password_hash=row.password_hash,
system_role=row.system_role, # type: ignore[arg-type]
# SQLite loses tzinfo on read; reattach UTC so downstream
# code can compare timestamps reliably.
created_at=row.created_at if row.created_at.tzinfo else row.created_at.replace(tzinfo=UTC),
oauth_provider=row.oauth_provider,
oauth_id=row.oauth_id,
needs_setup=row.needs_setup,
token_version=row.token_version,
)
@staticmethod
def _user_to_row(user: User) -> UserRow:
return UserRow(
id=str(user.id),
email=user.email,
password_hash=user.password_hash,
system_role=user.system_role,
created_at=user.created_at,
oauth_provider=user.oauth_provider,
oauth_id=user.oauth_id,
needs_setup=user.needs_setup,
token_version=user.token_version,
)
# ── CRUD ──────────────────────────────────────────────────────────
async def create_user(self, user: User) -> User:
"""Insert a new user. Raises ``ValueError`` on duplicate email."""
row = self._user_to_row(user)
async with self._sf() as session:
session.add(row)
try:
await session.commit()
except IntegrityError as exc:
await session.rollback()
raise ValueError(f"Email already registered: {user.email}") from exc
return user
async def get_user_by_id(self, user_id: str) -> User | None:
async with self._sf() as session:
row = await session.get(UserRow, user_id)
return self._row_to_user(row) if row is not None else None
async def get_user_by_email(self, email: str) -> User | None:
stmt = select(UserRow).where(UserRow.email == email)
async with self._sf() as session:
result = await session.execute(stmt)
row = result.scalar_one_or_none()
return self._row_to_user(row) if row is not None else None
async def update_user(self, user: User) -> User:
async with self._sf() as session:
row = await session.get(UserRow, str(user.id))
if row is None:
# Hard fail on concurrent delete: callers (reset_admin,
# password change handlers, _ensure_admin_user) all
# fetched the user just before this call, so a missing
# row here means the row vanished underneath us. Silent
# success would let the caller log "password reset" for
# a row that no longer exists.
raise UserNotFoundError(f"User {user.id} no longer exists")
row.email = user.email
row.password_hash = user.password_hash
row.system_role = user.system_role
row.oauth_provider = user.oauth_provider
row.oauth_id = user.oauth_id
row.needs_setup = user.needs_setup
row.token_version = user.token_version
await session.commit()
return user
async def count_users(self) -> int:
stmt = select(func.count()).select_from(UserRow)
async with self._sf() as session:
return await session.scalar(stmt) or 0
async def count_admin_users(self) -> int:
stmt = select(func.count()).select_from(UserRow).where(UserRow.system_role == "admin")
async with self._sf() as session:
return await session.scalar(stmt) or 0
async def get_user_by_oauth(self, provider: str, oauth_id: str) -> User | None:
stmt = select(UserRow).where(UserRow.oauth_provider == provider, UserRow.oauth_id == oauth_id)
async with self._sf() as session:
result = await session.execute(stmt)
row = result.scalar_one_or_none()
return self._row_to_user(row) if row is not None else None
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"""CLI tool to reset an admin password.
Usage:
python -m app.gateway.auth.reset_admin
python -m app.gateway.auth.reset_admin --email admin@example.com
Writes the new password to ``.deer-flow/admin_initial_credentials.txt``
(mode 0600) instead of printing it, so CI / log aggregators never see
the cleartext secret.
"""
from __future__ import annotations
import argparse
import asyncio
import secrets
import sys
from sqlalchemy import select
from app.gateway.auth.credential_file import write_initial_credentials
from app.gateway.auth.password import hash_password
from app.gateway.auth.repositories.sqlite import SQLiteUserRepository
from deerflow.persistence.user.model import UserRow
async def _run(email: str | None) -> int:
from deerflow.config import AppConfig
from deerflow.persistence.engine import (
close_engine,
get_session_factory,
init_engine_from_config,
)
# CLI entry: load config explicitly at the top, pass down through the closure.
config = AppConfig.from_file()
await init_engine_from_config(config.database)
try:
sf = get_session_factory()
if sf is None:
print("Error: persistence engine not available (check config.database).", file=sys.stderr)
return 1
repo = SQLiteUserRepository(sf)
if email:
user = await repo.get_user_by_email(email)
else:
# Find first admin via direct SELECT — repository does not
# expose a "first admin" helper and we do not want to add
# one just for this CLI.
async with sf() as session:
stmt = select(UserRow).where(UserRow.system_role == "admin").limit(1)
row = (await session.execute(stmt)).scalar_one_or_none()
if row is None:
user = None
else:
user = await repo.get_user_by_id(row.id)
if user is None:
if email:
print(f"Error: user '{email}' not found.", file=sys.stderr)
else:
print("Error: no admin user found.", file=sys.stderr)
return 1
new_password = secrets.token_urlsafe(16)
user.password_hash = hash_password(new_password)
user.token_version += 1
user.needs_setup = True
await repo.update_user(user)
cred_path = write_initial_credentials(user.email, new_password, label="reset")
print(f"Password reset for: {user.email}")
print(f"Credentials written to: {cred_path} (mode 0600)")
print("Next login will require setup (new email + password).")
return 0
finally:
await close_engine()
def main() -> None:
parser = argparse.ArgumentParser(description="Reset admin password")
parser.add_argument("--email", help="Admin email (default: first admin found)")
args = parser.parse_args()
exit_code = asyncio.run(_run(args.email))
sys.exit(exit_code)
if __name__ == "__main__":
main()