Commit Graph

15 Commits

Author SHA1 Message Date
Xinmin Zeng e93f658472 fix(stability): resolve P0 blockers from v2.0-m1-rc1 stability audit (#3107) (#3131)
* fix(task-tool): unwrap callback manager when locating usage recorder

`config["callbacks"]` may arrive as a `BaseCallbackManager` (e.g. the
`AsyncCallbackManager` LangChain hands to async tool runs), not just a plain
list. The previous `for cb in callbacks` loop raised
`TypeError: 'AsyncCallbackManager' object is not iterable`, which
`ToolErrorHandlingMiddleware` then converted into a failed `task` ToolMessage
even though the subagent had completed internally — Ultra mode lost subagent
results and the lead agent fell back to redoing the work.

Unwrap `BaseCallbackManager.handlers` before searching for the recorder.

Refs: bytedance/deer-flow#3107 (BUG-002)

* fix(frontend): treat any task tool error as a terminal subtask failure

The subtask card status machine matched only three English prefixes (`Task
Succeeded. Result:`, `Task failed.`, `Task timed out`). Anything else fell
through to `in_progress`, so a `task` tool error wrapped by
`ToolErrorHandlingMiddleware` (`Error: Tool 'task' failed ...`) left the card
spinning forever even after the run had ended.

Extract the prefix logic into `parseSubtaskResult` and recognise any leading
`Error:` token as a terminal failure. The extracted function is unit-tested
against the legacy prefixes plus the `AsyncCallbackManager` regression
captured in the upstream issue.

Refs: bytedance/deer-flow#3107 (BUG-007)

* fix(frontend): exclude hidden, reasoning, and tool payloads from chat export

`formatThreadAsMarkdown` / `formatThreadAsJSON` iterated raw messages without
running the UI-level `isHiddenFromUIMessage` filter. Exported transcripts
therefore included `hide_from_ui` system reminders, memory injections,
provider `reasoning_content`, tool calls, and tool result messages — content
that is intentionally hidden in the chat view.

Filter the export to the user-visible transcript by default and gate
reasoning / tool calls / tool messages / hidden messages behind explicit
`ExportOptions` flags so a future debug export can opt back in without
forking the formatter.

Refs: bytedance/deer-flow#3107 (BUG-006)

* fix(gateway): route get_config through get_app_config for mtime hot reload

`get_config(request)` returned the `app.state.config` snapshot captured at
startup. The worker / lead-agent path then threaded that frozen `AppConfig`
through `RunContext` and `agent_factory`, so per-run fields edited in
`config.yaml` (notably `max_tokens`) were ignored until the gateway process
was restarted — even though `get_app_config()` already does mtime-based
reload at the bottom layer.

Route the request dependency through `get_app_config()` directly. Runtime
`ContextVar` overrides (`push_current_app_config`) and test-injected
singletons (`set_app_config`) keep working; `app.state.config` is now only
read at startup for one-shot bootstrap (logging level, IM channels,
`langgraph_runtime` engines).

`tests/test_gateway_deps_config.py` encoded the old snapshot contract and is
removed; `tests/test_gateway_config_freshness.py` replaces it with mtime,
ContextVar, and `set_app_config` coverage. `test_skills_custom_router.py` and
`test_uploads_router.py` now inject test configs via FastAPI
`dependency_overrides[get_config]` instead of mutating `app.state.config`.

Document the hot-reload boundary in `backend/CLAUDE.md` so reviewers know
which fields are picked up on the next request vs. which still require a
restart (`database`, `checkpointer`, `run_events`, `stream_bridge`,
`sandbox.use`, `log_level`, `channels.*`).

Refs: bytedance/deer-flow#3107 (BUG-001)

* fix(gateway): broaden get_config 503 to any config-load failure

Address review feedback on the previous commit:

1. Narrow exception catch removed. The old contract returned 503 whenever
   `app.state.config is None`. The first cut only mapped
   `FileNotFoundError`, leaving `PermissionError`, YAML parse errors, and
   pydantic `ValidationError` to bubble up as 500. At the request boundary
   we treat any inability to materialise the config as "configuration not
   available" (503) and log the original exception so the operator still
   has the stack.

2. Removed the unused `request: Request` parameter and the matching
   `# noqa: ARG001`. FastAPI's `Depends()` does not require the dependency
   to accept `Request`; the only call site uses the no-arg form.

3. `backend/CLAUDE.md` boundary now lists the *reason* each field is
   restart-required (engine binding, singleton caching, one-shot
   `apply_logging_level`, etc.), not just the field name, so reviewers do
   not have to reverse-engineer the boundary themselves.

Tests parametrise four exception classes (`FileNotFoundError`,
`PermissionError`, `ValueError`, `RuntimeError`) and assert 503 for each.

Refs: bytedance/deer-flow#3107 (BUG-001)

* fix(task-tool): defend _find_usage_recorder against non-list callbacks

Address review feedback. The previous commit handled the two common shapes
LangChain hands to async tool runs — a plain `list[BaseCallbackHandler]` and
a `BaseCallbackManager` subclass — but iterated any other shape directly,
which would still raise `TypeError` if e.g. a single handler instance leaked
through without a list wrapper.

Treat any non-list, non-manager `config["callbacks"]` value as "no recorder"
rather than crash. Docstring now lists all four shapes explicitly. New tests
cover the single-handler-object case, `runtime is None`, `callbacks is None`,
and `runtime.config` being a non-dict — all required to be silent no-ops.

Refs: bytedance/deer-flow#3107 (BUG-002)

* fix(frontend): drop dead identity ternary and add opt-in export tests

Address review feedback on the previous export commit:

1. Removed the no-op `typeof msg.content === "string" ? msg.content : msg.content`
   expression in `formatThreadAsJSON`. Both branches returned the same value;
   the message content now flows through unchanged whether it is a string or
   the rich `MessageContent[]` shape (LangChain JSON-serialises the array
   structure correctly already).

2. Expanded the JSDoc on `ExportOptions` to make it clearer that the four
   flags are not currently wired to any UI control — callers wanting a debug
   export must build the options object explicitly. The default behaviour
   continues to match the explicit prescription in
   bytedance/deer-flow#3107 BUG-006.

3. Added opt-in coverage. The previous tests only exercised the
   `options = {}` default path; the new cases verify each flag flips the
   corresponding payload back into the export so a future debug-export
   surface does not silently break the contract.

Refs: bytedance/deer-flow#3107 (BUG-006)

* fix(frontend): export subtask prefix constants and document fallback intent

Address review feedback on the previous BUG-007 commit:

1. `SUCCESS_PREFIX`, `FAILURE_PREFIX`, `TIMEOUT_PREFIX`, and the
   `ERROR_WRAPPER_PATTERN` regex are now exported. The JSDoc explicitly
   pins them as part of the backend↔frontend contract defined in
   `task_tool.py` and `tool_error_handling_middleware.py`, so any future
   structured-status migration (e.g. backend writing
   `additional_kwargs.subagent_status` instead of leading text) can
   reference these from one canonical place rather than redefine them.

2. The `in_progress` fallback now carries a docstring explaining the
   deliberate choice — LangChain only ever emits a `ToolMessage` once the
   tool itself has returned, so unrecognised content means the contract
   has drifted and "still running" is the right operator signal (eagerly
   marking it terminal-failed would mask the drift).

No behaviour change; this is documentation and an API export.

Refs: bytedance/deer-flow#3107 (BUG-007)

* fix(gateway): drop app.state.config snapshot and freeze run_events_config

Address @ShenAC-SAC's BUG-001 review on #3131. The previous cut still
stored an ``AppConfig`` snapshot on ``app.state.config`` for startup
bootstrap. Two follow-on hazards from that:

1. Future code touching the gateway lifespan could accidentally start
   reading ``app.state.config`` again, silently regressing the request
   hot path back to a stale snapshot.
2. ``get_run_context()`` paired a freshly-reloaded ``AppConfig`` with the
   startup-bound ``event_store`` and a *live* ``run_events_config``
   field — so an operator who edited ``run_events.backend`` mid-flight
   would have produced a run context whose ``event_store`` and
   ``run_events_config`` referred to different backends.

Clean approach (aligned with the direction in PR #3128):

- ``lifespan()`` keeps a local ``startup_config`` variable and passes it
  explicitly into ``langgraph_runtime(app, startup_config)`` and into
  ``start_channel_service``. No ``app.state.config`` attribute is set at
  any point.
- ``langgraph_runtime`` now accepts ``startup_config`` as a required
  parameter, removing the ``getattr(app.state, "config", None)`` lookup
  and the "config not initialised" runtime error.
- The matching ``run_events_config`` is frozen onto ``app.state`` next
  to ``run_event_store`` so ``get_run_context`` reads the two from the
  same startup-time source. ``app_config`` continues to be resolved
  live via ``get_app_config()``.
- ``backend/CLAUDE.md`` boundary explanation updated to spell out the
  ``startup_config`` / ``get_app_config()`` split.

New regression test ``test_run_context_app_config_reflects_yaml_edit``
exercises the worker-feeding path: it asserts that ``ctx.app_config``
follows a mid-flight ``config.yaml`` edit while
``ctx.run_events_config`` stays frozen to the startup snapshot the
event store was built from.

Refs: bytedance/deer-flow#3107 (BUG-001), bytedance/deer-flow#3131 review

* fix(frontend): parse Task cancelled and polling timed out as terminal

Address @ShenAC-SAC's BUG-007 review on #3131. `task_tool.py` actually
emits five terminal strings:

- `Task Succeeded. Result: …`
- `Task failed. …`
- `Task timed out. …`
- `Task cancelled by user.`               ← previously matched none
- `Task polling timed out after N minutes …` ← previously matched none

The previous cut handled three; the last two fell through to the
"unknown content" branch and pushed the subtask card back to
`in_progress` even though the backend had already reached a terminal
state. Add explicit matches plus regression tests for both. The
`in_progress` fallback is now reserved for genuinely unrecognised
output (i.e. contract drift), as documented.

Refs: bytedance/deer-flow#3107 (BUG-007), bytedance/deer-flow#3131 review

* fix(frontend): sanitize JSON export content via the Markdown content path

Address @ShenAC-SAC's BUG-006 review and the Copilot inline comment on
#3131. The previous cut filtered hidden/tool messages out of the JSON
export but still serialised `msg.content` verbatim, so:

- inline `<think>…</think>` wrappers stayed in the exported `content`
  even with `includeReasoning: false`,
- content-array thinking blocks leaked the `thinking` field,
- `<uploaded_files>…</uploaded_files>` markers leaked the workspace
  paths a user uploaded files to.

JSON now goes through the same sanitiser the Markdown path uses
(`extractContentFromMessage` + `stripUploadedFilesTag`). Reasoning and
tool_calls remain gated behind their `ExportOptions` flags. AI / human
rows that sanitise to empty content with no opted-in reasoning or tool
calls are dropped so the JSON matches the Markdown path's `continue`
on empty assistant fragments.

New regression tests cover the three leak shapes the reviewer called
out plus the empty-content-drop case.

Refs: bytedance/deer-flow#3107 (BUG-006), bytedance/deer-flow#3131 review

* test(gateway): align lifespan stub with langgraph_runtime two-arg signature

Codex round-3 review of c0bc7a06 flagged this: changing
`langgraph_runtime` to require `startup_config` as a second positional
argument broke the one-arg stub `_noop_langgraph_runtime(_app)` in
`test_gateway_lifespan_shutdown.py`, which is patched into
`app.gateway.app.langgraph_runtime` by the lifespan shutdown bounded-timeout
regression. Lifespan would then call the stub with two args and raise
`TypeError` before the bounded-shutdown assertion ran.

Update the stub to match the new signature. The shutdown test itself is
unaffected — it only cares about the channel `stop_channel_service` hang
path.

Refs: bytedance/deer-flow#3107 (BUG-001), bytedance/deer-flow#3131 review

* fix(frontend): strip every known backend marker in export, not just uploads

Codex round-3 review of 258ca800 and the matching maintainer feedback on
PR #3131 made the same point: the JSON export now ran the
Markdown-side sanitiser, but that sanitiser only stripped
`<uploaded_files>`. The full set of payloads middleware embeds inside
message `content` is larger:

- `<uploaded_files>` — `UploadsMiddleware`
- `<system-reminder>` — `DynamicContextMiddleware`
- `<memory>` — `DynamicContextMiddleware` (nested inside system-reminder)
- `<current_date>` — `DynamicContextMiddleware`

The primary protection is still `isHiddenFromUIMessage`: the
`<system-reminder>` HumanMessage is marked `hide_from_ui: true` and never
reaches the formatter. This commit adds the second line of defence so a
regression that drops the `hide_from_ui` flag — or any future middleware
that injects the same tag vocabulary into a visible HumanMessage —
cannot leak the payload into the export file.

Concrete changes:

- New `INTERNAL_MARKER_TAGS` constant + `stripInternalMarkers(content)`
  helper in `core/messages/utils.ts`. The constant doubles as
  documentation for the backend↔frontend contract.
- `formatMessageContent` in `export.ts` now calls `stripInternalMarkers`
  instead of `stripUploadedFilesTag`. UI render paths
  (`message-list-item.tsx`) keep using the narrower function so a user
  legitimately typing `<memory>` in a meta-discussion is preserved.
- The "drop empty rows" guard in `buildJSONMessage` switched from
  `=== undefined` to truthy `!` checks. Codex spotted the asymmetry: when
  `extractReasoningContentFromMessage` returned the empty string (which it
  legitimately can), the JSON path emitted `{reasoning: ""}` while the
  Markdown path's `!reasoning` `continue` correctly dropped the row.

New regression tests cover the defence-in-depth strip with a
`<system-reminder><memory><current_date>` payload deliberately *not*
marked `hide_from_ui`; tool-message sanitization under
`includeToolMessages: true`; the mixed-content-array case
(`thinking + text + image_url`); and the opted-in empty-reasoning drop.

Live verification on a real Ultra-mode thread that uploaded a PDF
(`曾鑫民-薪资交易流水.pdf`): backend state's first HumanMessage carries the
`<uploaded_files>` block (with `/mnt/user-data/uploads/...` paths) as part
of a content-array. The Markdown and JSON export blobs both come back
free of `<uploaded_files>`, `<system-reminder>`, `<current_date>`,
`tool_calls`, and reasoning — while preserving the user's `这是什么 ?`
prompt and the assistant's visible answer.

Refs: bytedance/deer-flow#3107 (BUG-006), bytedance/deer-flow#3131 review

* test(frontend): cover trim, varied N, and pre-execution Error: prefixes

Codex round-3 review of 50e2c257 flagged three coverage gaps in the
subtask-status parser:

1. `Task cancelled by user.` and `Task polling timed out` previously had
   no whitespace-trim coverage — the original trim test only exercised
   the success prefix. Streaming chunks can arrive with leading/trailing
   newlines; the regex needed an explicit assertion.
2. The polling-timeout case was tested only at one `N` (15 minutes). The
   backend interpolates the live `timeout_seconds // 60` value, so the
   matcher must hold for any positive integer. Now we run the case for
   1, 5, and 60 minutes.
3. `task_tool.py` also emits three `Error:` strings for pre-execution
   failures — unknown subagent type, host-bash disabled, and "task
   disappeared from background tasks". They are intentionally handled by
   `ERROR_WRAPPER_PATTERN` rather than dedicated prefixes (the wrapper
   already produces the right terminal-failed shape) but had no test
   coverage proving that wiring. Codex was right that a refactor splitting
   one of them off into its own prefix would silently break things.

The JSDoc on the constants block now spells the three pre-execution
errors out so the relationship between `task_tool.py` returns and the
prefix vocabulary is explicit.

No production code change beyond the docstring — this commit is pure
coverage hardening for the contract that already exists.

Refs: bytedance/deer-flow#3107 (BUG-007), bytedance/deer-flow#3131 review
2026-05-21 21:18:10 +08:00
ChenglongZ 7a3c58a733 Fix duplicate gateway upload filenames (#2789) 2026-05-09 18:02:40 +08:00
Hinotobi e543bbf5d6 [security] fix(upload): reject symlinked upload destinations (#2623)
* fix: reject symlinked upload destinations

* test: harden upload destination checks

* fix: address PR feedback for #2623

* test: cover safe upload re-uploads

* fix: preserve upload limit checks after rebase

* fix(upload): stream safe HTTP upload writes
2026-05-02 15:19:28 +08:00
KiteEater 8939ccaed2 fix(uploads): enforce streaming upload limits in gateway (#2589)
* fix: enforce gateway upload limits

* fix: acquire sandbox before upload writes

* Fix upload limit config wiring

* Sanitize upload size error filenames

* test: call upload routes unwrapped

* fix: guard upload limits endpoint

---------

Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
2026-05-01 20:19:30 +08:00
greatmengqi e82940c03d refactor: thread release config through lead path (#2612)
Co-authored-by: greatmengqi <chenmengqi.0376@bytedance.com>
2026-04-28 14:53:18 +08:00
JeffJiang da174dfd4d feat: implement process-local internal authentication for Gateway and enhance CSRF handling 2026-04-26 22:20:57 +08:00
greatmengqi 94eee95fe0 feat(auth): release-validation pass for 2.0-rc — 12 blockers + simplify follow-ups (#2008)
* feat(auth): introduce backend auth module

Port RFC-001 authentication core from PR #1728:
- JWT token handling (create_access_token, decode_token, TokenPayload)
- Password hashing (bcrypt) with verify_password
- SQLite UserRepository with base interface
- Provider Factory pattern (LocalAuthProvider)
- CLI reset_admin tool
- Auth-specific errors (AuthErrorCode, TokenError, AuthErrorResponse)

Deps:
- bcrypt>=4.0.0
- pyjwt>=2.9.0
- email-validator>=2.0.0
- backend/uv.toml pins public PyPI index

Tests: 12 pure unit tests (test_auth_config.py, test_auth_errors.py).

Scope note: authz.py, test_auth.py, and test_auth_type_system.py are
deferred to commit 2 because they depend on middleware and deps wiring
that is not yet in place. Commit 1 stays "pure new files only" as the
spec mandates.

* feat(auth): wire auth end-to-end (middleware + frontend replacement)

Backend:
- Port auth_middleware, csrf_middleware, langgraph_auth, routers/auth
- Port authz decorator (owner_filter_key defaults to 'owner_id')
- Merge app.py: register AuthMiddleware + CSRFMiddleware + CORS, add
  _ensure_admin_user lifespan hook, _migrate_orphaned_threads helper,
  register auth router
- Merge deps.py: add get_local_provider, get_current_user_from_request,
  get_optional_user_from_request; keep get_current_user as thin str|None
  adapter for feedback router
- langgraph.json: add auth path pointing to langgraph_auth.py:auth
- Rename metadata['user_id'] -> metadata['owner_id'] in langgraph_auth
  (both metadata write and LangGraph filter dict) + test fixtures

Frontend:
- Delete better-auth library and api catch-all route
- Remove better-auth npm dependency and env vars (BETTER_AUTH_SECRET,
  BETTER_AUTH_GITHUB_*) from env.js
- Port frontend/src/core/auth/* (AuthProvider, gateway-config,
  proxy-policy, server-side getServerSideUser, types)
- Port frontend/src/core/api/fetcher.ts
- Port (auth)/layout, (auth)/login, (auth)/setup pages
- Rewrite workspace/layout.tsx as server component that calls
  getServerSideUser and wraps in AuthProvider
- Port workspace/workspace-content.tsx for the client-side sidebar logic

Tests:
- Port 5 auth test files (test_auth, test_auth_middleware,
  test_auth_type_system, test_ensure_admin, test_langgraph_auth)
- 176 auth tests PASS

After this commit: login/logout/registration flow works, but persistence
layer does not yet filter by owner_id. Commit 4 closes that gap.

* feat(auth): account settings page + i18n

- Port account-settings-page.tsx (change password, change email, logout)
- Wire into settings-dialog.tsx as new "account" section with UserIcon,
  rendered first in the section list
- Add i18n keys:
  - en-US/zh-CN: settings.sections.account ("Account" / "账号")
  - en-US/zh-CN: button.logout ("Log out" / "退出登录")
  - types.ts: matching type declarations

* feat(auth): enforce owner_id across 2.0-rc persistence layer

Add request-scoped contextvar-based owner filtering to threads_meta,
runs, run_events, and feedback repositories. Router code is unchanged
— isolation is enforced at the storage layer so that any caller that
forgets to pass owner_id still gets filtered results, and new routes
cannot accidentally leak data.

Core infrastructure
-------------------
- deerflow/runtime/user_context.py (new):
  - ContextVar[CurrentUser | None] with default None
  - runtime_checkable CurrentUser Protocol (structural subtype with .id)
  - set/reset/get/require helpers
  - AUTO sentinel + resolve_owner_id(value, method_name) for sentinel
    three-state resolution: AUTO reads contextvar, explicit str
    overrides, explicit None bypasses the filter (for migration/CLI)

Repository changes
------------------
- ThreadMetaRepository: create/get/search/update_*/delete gain
  owner_id=AUTO kwarg; read paths filter by owner, writes stamp it,
  mutations check ownership before applying
- RunRepository: put/get/list_by_thread/delete gain owner_id=AUTO kwarg
- FeedbackRepository: create/get/list_by_run/list_by_thread/delete
  gain owner_id=AUTO kwarg
- DbRunEventStore: list_messages/list_events/list_messages_by_run/
  count_messages/delete_by_thread/delete_by_run gain owner_id=AUTO
  kwarg. Write paths (put/put_batch) read contextvar softly: when a
  request-scoped user is available, owner_id is stamped; background
  worker writes without a user context pass None which is valid
  (orphan row to be bound by migration)

Schema
------
- persistence/models/run_event.py: RunEventRow.owner_id = Mapped[
  str | None] = mapped_column(String(64), nullable=True, index=True)
- No alembic migration needed: 2.0 ships fresh, Base.metadata.create_all
  picks up the new column automatically

Middleware
----------
- auth_middleware.py: after cookie check, call get_optional_user_from_
  request to load the real User, stamp it into request.state.user AND
  the contextvar via set_current_user, reset in a try/finally. Public
  paths and unauthenticated requests continue without contextvar, and
  @require_auth handles the strict 401 path

Test infrastructure
-------------------
- tests/conftest.py: @pytest.fixture(autouse=True) _auto_user_context
  sets a default SimpleNamespace(id="test-user-autouse") on every test
  unless marked @pytest.mark.no_auto_user. Keeps existing 20+
  persistence tests passing without modification
- pyproject.toml [tool.pytest.ini_options]: register no_auto_user
  marker so pytest does not emit warnings for opt-out tests
- tests/test_user_context.py: 6 tests covering three-state semantics,
  Protocol duck typing, and require/optional APIs
- tests/test_thread_meta_repo.py: one test updated to pass owner_id=
  None explicitly where it was previously relying on the old default

Test results
------------
- test_user_context.py: 6 passed
- test_auth*.py + test_langgraph_auth.py + test_ensure_admin.py: 127
- test_run_event_store / test_run_repository / test_thread_meta_repo
  / test_feedback: 92 passed
- Full backend suite: 1905 passed, 2 failed (both @requires_llm flaky
  integration tests unrelated to auth), 1 skipped

* feat(auth): extend orphan migration to 2.0-rc persistence tables

_ensure_admin_user now runs a three-step pipeline on every boot:

  Step 1 (fatal):     admin user exists / is created / password is reset
  Step 2 (non-fatal): LangGraph store orphan threads → admin
  Step 3 (non-fatal): SQL persistence tables → admin
    - threads_meta
    - runs
    - run_events
    - feedback

Each step is idempotent. The fatal/non-fatal split mirrors PR #1728's
original philosophy: admin creation failure blocks startup (the system
is unusable without an admin), whereas migration failures log a warning
and let the service proceed (a partial migration is recoverable; a
missing admin is not).

Key helpers
-----------
- _iter_store_items(store, namespace, *, page_size=500):
  async generator that cursor-paginates across LangGraph store pages.
  Fixes PR #1728's hardcoded limit=1000 bug that would silently lose
  orphans beyond the first page.

- _migrate_orphaned_threads(store, admin_user_id):
  Rewritten to use _iter_store_items. Returns the migrated count so the
  caller can log it; raises only on unhandled exceptions.

- _migrate_orphan_sql_tables(admin_user_id):
  Imports the 4 ORM models lazily, grabs the shared session factory,
  runs one UPDATE per table in a single transaction, commits once.
  No-op when no persistence backend is configured (in-memory dev).

Tests: test_ensure_admin.py (8 passed)

* test(auth): port AUTH test plan docs + lint/format pass

- Port backend/docs/AUTH_TEST_PLAN.md and AUTH_UPGRADE.md from PR #1728
- Rename metadata.user_id → metadata.owner_id in AUTH_TEST_PLAN.md
  (4 occurrences from the original PR doc)
- ruff auto-fix UP037 in sentinel type annotations: drop quotes around
  "str | None | _AutoSentinel" now that from __future__ import
  annotations makes them implicit string forms
- ruff format: 2 files (app/gateway/app.py, runtime/user_context.py)

Note on test coverage additions:
- conftest.py autouse fixture was already added in commit 4 (had to
  be co-located with the repository changes to keep pre-existing
  persistence tests passing)
- cross-user isolation E2E tests (test_owner_isolation.py) deferred
  — enforcement is already proven by the 98-test repository suite
  via the autouse fixture + explicit _AUTO sentinel exercises
- New test cases (TC-API-17..20, TC-ATK-13, TC-MIG-01..07) listed
  in AUTH_TEST_PLAN.md are deferred to a follow-up PR — they are
  manual-QA test cases rather than pytest code, and the spec-level
  coverage is already met by test_user_context.py + the 98-test
  repository suite.

Final test results:
- Auth suite (test_auth*, test_langgraph_auth, test_ensure_admin,
  test_user_context): 186 passed
- Persistence suite (test_run_event_store, test_run_repository,
  test_thread_meta_repo, test_feedback): 98 passed
- Lint: ruff check + ruff format both clean

* test(auth): add cross-user isolation test suite

10 tests exercising the storage-layer owner filter by manually
switching the user_context contextvar between two users. Verifies
the safety invariant:

  After a repository write with owner_id=A, a subsequent read with
  owner_id=B must not return the row, and vice versa.

Covers all 4 tables that own user-scoped data:

TC-API-17  threads_meta  — read, search, update, delete cross-user
TC-API-18  runs          — get, list_by_thread, delete cross-user
TC-API-19  run_events    — list_messages, list_events, count_messages,
                           delete_by_thread (CRITICAL: raw conversation
                           content leak vector)
TC-API-20  feedback      — get, list_by_run, delete cross-user

Plus two meta-tests verifying the sentinel pattern itself:
- AUTO + unset contextvar raises RuntimeError
- explicit owner_id=None bypasses the filter (migration escape hatch)

Architecture note
-----------------
These tests bypass the HTTP layer by design. The full chain
(cookie → middleware → contextvar → repository) is covered piecewise:

- test_auth_middleware.py: middleware sets contextvar from cookies
- test_owner_isolation.py: repositories enforce isolation when
  contextvar is set to different users

Together they prove the end-to-end safety property without the
ceremony of spinning up a full TestClient + in-memory DB for every
router endpoint.

Tests pass: 231 (full auth + persistence + isolation suite)
Lint: clean

* refactor(auth): migrate user repository to SQLAlchemy ORM

Move the users table into the shared persistence engine so auth
matches the pattern of threads_meta, runs, run_events, and feedback —
one engine, one session factory, one schema init codepath.

New files
---------
- persistence/user/__init__.py, persistence/user/model.py: UserRow
  ORM class with partial unique index on (oauth_provider, oauth_id)
- Registered in persistence/models/__init__.py so
  Base.metadata.create_all() picks it up

Modified
--------
- auth/repositories/sqlite.py: rewritten as async SQLAlchemy,
  identical constructor pattern to the other four repositories
  (def __init__(self, session_factory) + self._sf = session_factory)
- auth/config.py: drop users_db_path field — storage is configured
  through config.database like every other table
- deps.py/get_local_provider: construct SQLiteUserRepository with
  the shared session factory, fail fast if engine is not initialised
- tests/test_auth.py: rewrite test_sqlite_round_trip_new_fields to
  use the shared engine (init_engine + close_engine in a tempdir)
- tests/test_auth_type_system.py: add per-test autouse fixture that
  spins up a scratch engine and resets deps._cached_* singletons

* refactor(auth): remove SQL orphan migration (unused in supported scenarios)

The _migrate_orphan_sql_tables helper existed to bind NULL owner_id
rows in threads_meta, runs, run_events, and feedback to the admin on
first boot. But in every supported upgrade path, it's a no-op:

  1. Fresh install: create_all builds fresh tables, no legacy rows
  2. No-auth → with-auth (no existing persistence DB): persistence
     tables are created fresh by create_all, no legacy rows
  3. No-auth → with-auth (has existing persistence DB from #1930):
     NOT a supported upgrade path — "有 DB 到有 DB" schema evolution
     is out of scope; users wipe DB or run manual ALTER

So the SQL orphan migration never has anything to do in the
supported matrix. Delete the function, simplify _ensure_admin_user
from a 3-step pipeline to a 2-step one (admin creation + LangGraph
store orphan migration only).

LangGraph store orphan migration stays: it serves the real
"no-auth → with-auth" upgrade path where a user's existing LangGraph
thread metadata has no owner_id field and needs to be stamped with
the newly-created admin's id.

Tests: 284 passed (auth + persistence + isolation)
Lint: clean

* security(auth): write initial admin password to 0600 file instead of logs

CodeQL py/clear-text-logging-sensitive-data flagged 3 call sites that
logged the auto-generated admin password to stdout via logger.info().
Production log aggregators (ELK/Splunk/etc) would have captured those
cleartext secrets. Replace with a shared helper that writes to
.deer-flow/admin_initial_credentials.txt with mode 0600, and log only
the path.

New file
--------
- app/gateway/auth/credential_file.py: write_initial_credentials()
  helper. Takes email, password, and a "initial"/"reset" label.
  Creates .deer-flow/ if missing, writes a header comment plus the
  email+password, chmods 0o600, returns the absolute Path.

Modified
--------
- app/gateway/app.py: both _ensure_admin_user paths (fresh creation
  + needs_setup password reset) now write to file and log the path
- app/gateway/auth/reset_admin.py: rewritten to use the shared ORM
  repo (SQLiteUserRepository with session_factory) and the
  credential_file helper. The previous implementation was broken
  after the earlier ORM refactor — it still imported _get_users_conn
  and constructed SQLiteUserRepository() without a session factory.

No tests changed — the three password-log sites are all exercised
via existing test_ensure_admin.py which checks that startup
succeeds, not that a specific string appears in logs.

CodeQL alerts 272, 283, 284: all resolved.

* security(auth): strict JWT validation in middleware (fix junk cookie bypass)

AUTH_TEST_PLAN test 7.5.8 expects junk cookies to be rejected with
401. The previous middleware behaviour was "presence-only": check
that some access_token cookie exists, then pass through. In
combination with my Task-12 decision to skip @require_auth
decorators on routes, this created a gap where a request with any
cookie-shaped string (e.g. access_token=not-a-jwt) would bypass
authentication on routes that do not touch the repository
(/api/models, /api/mcp/config, /api/memory, /api/skills, …).

Fix: middleware now calls get_current_user_from_request() strictly
and catches the resulting HTTPException to render a 401 with the
proper fine-grained error code (token_invalid, token_expired,
user_not_found, …). On success it stamps request.state.user and
the contextvar so repository-layer owner filters work downstream.

The 4 old "_with_cookie_passes" tests in test_auth_middleware.py
were written for the presence-only behaviour; they asserted that
a junk cookie would make the handler return 200. They are renamed
to "_with_junk_cookie_rejected" and their assertions flipped to
401. The negative path (no cookie → 401 not_authenticated)
is unchanged.

Verified:
  no cookie       → 401 not_authenticated
  junk cookie     → 401 token_invalid     (the fixed bug)
  expired cookie  → 401 token_expired

Tests: 284 passed (auth + persistence + isolation)
Lint: clean

* security(auth): wire @require_permission(owner_check=True) on isolation routes

Apply the require_permission decorator to all 28 routes that take a
{thread_id} path parameter. Combined with the strict middleware
(previous commit), this gives the double-layer protection that
AUTH_TEST_PLAN test 7.5.9 documents:

  Layer 1 (AuthMiddleware): cookie + JWT validation, rejects junk
                            cookies and stamps request.state.user
  Layer 2 (@require_permission with owner_check=True): per-resource
                            ownership verification via
                            ThreadMetaStore.check_access — returns
                            404 if a different user owns the thread

The decorator's owner_check branch is rewritten to use the SQL
thread_meta_repo (the 2.0-rc persistence layer) instead of the
LangGraph store path that PR #1728 used (_store_get / get_store
in routers/threads.py). The inject_record convenience is dropped
— no caller in 2.0 needs the LangGraph blob, and the SQL repo has
a different shape.

Routes decorated (28 total):
- threads.py: delete, patch, get, get-state, post-state, post-history
- thread_runs.py: post-runs, post-runs-stream, post-runs-wait,
  list_runs, get_run, cancel_run, join_run, stream_existing_run,
  list_thread_messages, list_run_messages, list_run_events,
  thread_token_usage
- feedback.py: create, list, stats, delete
- uploads.py: upload (added Request param), list, delete
- artifacts.py: get_artifact
- suggestions.py: generate (renamed body parameter to avoid
  conflict with FastAPI Request)

Test fixes:
- test_suggestions_router.py: bypass the decorator via __wrapped__
  (the unit tests cover parsing logic, not auth — no point spinning
  up a thread_meta_repo just to test JSON unwrapping)
- test_auth_middleware.py 4 fake-cookie tests: already updated in
  the previous commit (745bf432)

Tests: 293 passed (auth + persistence + isolation + suggestions)
Lint: clean

* security(auth): defense-in-depth fixes from release validation pass

Eight findings caught while running the AUTH_TEST_PLAN end-to-end against
the deployed sg_dev stack. Each is a pre-condition for shipping
release/2.0-rc that the previous PRs missed.

Backend hardening
- routers/auth.py: rate limiter X-Real-IP now requires AUTH_TRUSTED_PROXIES
  whitelist (CIDR/IP allowlist). Without nginx in front, the previous code
  honored arbitrary X-Real-IP, letting an attacker rotate the header to
  fully bypass the per-IP login lockout.
- routers/auth.py: 36-entry common-password blocklist via Pydantic
  field_validator on RegisterRequest + ChangePasswordRequest. The shared
  _validate_strong_password helper keeps the constraint in one place.
- routers/threads.py: ThreadCreateRequest + ThreadPatchRequest strip
  server-reserved metadata keys (owner_id, user_id) via Pydantic
  field_validator so a forged value can never round-trip back to other
  clients reading the same thread. The actual ownership invariant stays
  on the threads_meta row; this closes the metadata-blob echo gap.
- authz.py + thread_meta/sql.py: require_permission gains a require_existing
  flag plumbed through check_access(require_existing=True). Destructive
  routes (DELETE/PATCH/state-update/runs/feedback) now treat a missing
  thread_meta row as 404 instead of "untracked legacy thread, allow",
  closing the cross-user delete-idempotence gap where any user could
  successfully DELETE another user's deleted thread.
- repositories/sqlite.py + base.py: update_user raises UserNotFoundError
  on a vanished row instead of silently returning the input. Concurrent
  delete during password reset can no longer look like a successful update.
- runtime/user_context.py: resolve_owner_id() coerces User.id (UUID) to
  str at the contextvar boundary so SQLAlchemy String(64) columns can
  bind it. The whole 2.0-rc isolation pipeline was previously broken
  end-to-end (POST /api/threads → 500 "type 'UUID' is not supported").
- persistence/engine.py: SQLAlchemy listener enables PRAGMA journal_mode=WAL,
  synchronous=NORMAL, foreign_keys=ON on every new SQLite connection.
  TC-UPG-06 in the test plan expects WAL; previous code shipped with the
  default 'delete' journal.
- auth_middleware.py: stamp request.state.auth = AuthContext(...) so
  @require_permission's short-circuit fires; previously every isolation
  request did a duplicate JWT decode + users SELECT. Also unifies the
  401 payload through AuthErrorResponse(...).model_dump().
- app.py: _ensure_admin_user restructure removes the noqa F821 scoping
  bug where 'password' was referenced outside the branch that defined it.
  New _announce_credentials helper absorbs the duplicate log block in
  the fresh-admin and reset-admin branches.

* fix(frontend+nginx): rollout CSRF on every state-changing client path

The frontend was 100% broken in gateway-pro mode for any user trying to
open a specific chat thread. Three cumulative bugs each silently
masked the next.

LangGraph SDK CSRF gap (api-client.ts)
- The Client constructor took only apiUrl, no defaultHeaders, no fetch
  interceptor. The SDK's internal fetch never sent X-CSRF-Token, so
  every state-changing /api/langgraph-compat/* call (runs/stream,
  threads/search, threads/{tid}/history, ...) hit CSRFMiddleware and
  got 403 before reaching the auth check. UI symptom: empty thread page
  with no error message; the SPA's hooks swallowed the rejection.
- Fix: pass an onRequest hook that injects X-CSRF-Token from the
  csrf_token cookie per request. Reading the cookie per call (not at
  construction time) handles login / logout / password-change cookie
  rotation transparently. The SDK's prepareFetchOptions calls
  onRequest for both regular requests AND streaming/SSE/reconnect, so
  the same hook covers runs.stream and runs.joinStream.

Raw fetch CSRF gap (7 files)
- Audit: 11 frontend fetch sites, only 2 included CSRF (login/setup +
  account-settings change-password). The other 7 routed through raw
  fetch() with no header — suggestions, memory, agents, mcp, skills,
  uploads, and the local thread cleanup hook all 403'd silently.
- Fix: enhance fetcher.ts:fetchWithAuth to auto-inject X-CSRF-Token on
  POST/PUT/DELETE/PATCH from a single shared readCsrfCookie() helper.
  Convert all 7 raw fetch() callers to fetchWithAuth so the contract
  is centrally enforced. api-client.ts and fetcher.ts share
  readCsrfCookie + STATE_CHANGING_METHODS to avoid drift.

nginx routing + buffering (nginx.local.conf)
- The auth feature shipped without updating the nginx config: per-API
  explicit location blocks but no /api/v1/auth/, /api/feedback, /api/runs.
  The frontend's client-side fetches to /api/v1/auth/login/local 404'd
  from the Next.js side because nginx routed /api/* to the frontend.
- Fix: add catch-all `location /api/` that proxies to the gateway.
  nginx longest-prefix matching keeps the explicit blocks (/api/models,
  /api/threads regex, /api/langgraph/, ...) winning for their paths.
- Fix: disable proxy_buffering + proxy_request_buffering for the
  frontend `location /` block. Without it, nginx tries to spool large
  Next.js chunks into /var/lib/nginx/proxy (root-owned) and fails with
  Permission denied → ERR_INCOMPLETE_CHUNKED_ENCODING → ChunkLoadError.

* test(auth): release-validation test infra and new coverage

Test fixtures and unit tests added during the validation pass.

Router test helpers (NEW: tests/_router_auth_helpers.py)
- make_authed_test_app(): builds a FastAPI test app with a stub
  middleware that stamps request.state.user + request.state.auth and a
  permissive thread_meta_repo mock. TestClient-based router tests
  (test_artifacts_router, test_threads_router) use it instead of bare
  FastAPI() so the new @require_permission(owner_check=True) decorators
  short-circuit cleanly.
- call_unwrapped(): walks the __wrapped__ chain to invoke the underlying
  handler without going through the authz wrappers. Direct-call tests
  (test_uploads_router) use it. Typed with ParamSpec so the wrapped
  signature flows through.

Backend test additions
- test_auth.py: 7 tests for the new _get_client_ip trust model (no
  proxy / trusted proxy / untrusted peer / XFF rejection / invalid
  CIDR / no client). 5 tests for the password blocklist (literal,
  case-insensitive, strong password accepted, change-password binding,
  short-password length-check still fires before blocklist).
  test_update_user_raises_when_row_concurrently_deleted: closes a
  shipped-without-coverage gap on the new UserNotFoundError contract.
- test_thread_meta_repo.py: 4 tests for check_access(require_existing=True)
  — strict missing-row denial, strict owner match, strict owner mismatch,
  strict null-owner still allowed (shared rows survive the tightening).
- test_ensure_admin.py: 3 tests for _migrate_orphaned_threads /
  _iter_store_items pagination, covering the TC-UPG-02 upgrade story
  end-to-end via mock store. Closes the gap where the cursor pagination
  was untested even though the previous PR rewrote it.
- test_threads_router.py: 5 tests for _strip_reserved_metadata
  (owner_id removal, user_id removal, safe-keys passthrough, empty
  input, both-stripped).
- test_auth_type_system.py: replace "password123" fixtures with
  Tr0ub4dor3a / AnotherStr0ngPwd! so the new password blocklist
  doesn't reject the test data.

* docs(auth): refresh TC-DOCKER-05 + document Docker validation gap

- AUTH_TEST_PLAN.md TC-DOCKER-05: the previous expectation
  ("admin password visible in docker logs") was stale after the simplify
  pass that moved credentials to a 0600 file. The grep "Password:" check
  would have silently failed and given a false sense of coverage. New
  expectation matches the actual file-based path: 0600 file in
  DEER_FLOW_HOME, log shows the path (not the secret), reverse-grep
  asserts no leaked password in container logs.
- NEW: docs/AUTH_TEST_DOCKER_GAP.md documents the only un-executed
  block in the test plan (TC-DOCKER-01..06). Reason: sg_dev validation
  host has no Docker daemon installed. The doc maps each Docker case
  to an already-validated bare-metal equivalent (TC-1.1, TC-REENT-01,
  TC-API-02 etc.) so the gap is auditable, and includes pre-flight
  reproduction steps for whoever has Docker available.

---------

Co-authored-by: greatmengqi <chenmengqi.0376@bytedance.com>
2026-04-26 11:08:11 +08:00
Hinotobi 80e210f5bb [security] fix(uploads): require explicit opt-in for host-side document conversion (#2332)
* fix: disable host-side upload conversion by default

* fix: address PR review comments on upload conversion gate
2026-04-18 22:47:42 +08:00
Nan Gao 55bc09ac33 fix(backend): fix uploads for mounted sandbox providers (#2199)
* fix uploads for mounted sandbox providers

* Potential fix for pull request finding

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

---------

Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
2026-04-14 10:44:31 +08:00
Admire 40a4acbbed fix(sandbox): Relax upload permissions for aio sandbox sync (#1409)
* Relax upload permissions for aio sandbox sync

* Harden upload permission sync checks

---------

Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
2026-03-27 17:37:44 +08:00
greatmengqi b8bc80d89b refactor: extract shared skill installer and upload manager to harness (#1202)
* refactor: extract shared skill installer and upload manager to harness

Move duplicated business logic from Gateway routers and Client into
shared harness modules, eliminating code duplication.

New shared modules:
- deerflow.skills.installer: 6 functions (zip security, extraction, install)
- deerflow.uploads.manager: 7 functions (normalize, deduplicate, validate,
  list, delete, get_uploads_dir, ensure_uploads_dir)

Key improvements:
- SkillAlreadyExistsError replaces stringly-typed 409 status routing
- normalize_filename rejects backslash-containing filenames
- Read paths (list/delete) no longer mkdir via get_uploads_dir
- Write paths use ensure_uploads_dir for explicit directory creation
- list_files_in_dir does stat inside scandir context (no re-stat)
- install_skill_from_archive uses single is_file() check (one syscall)
- Fix agent config key not reset on update_mcp_config/update_skill

Tests: 42 new (22 installer + 20 upload manager) + client hardening

* refactor: centralize upload URL construction and clean up installer

- Extract upload_virtual_path(), upload_artifact_url(), enrich_file_listing()
  into shared manager.py, eliminating 6 duplicated URL constructions across
  Gateway router and Client
- Derive all upload URLs from VIRTUAL_PATH_PREFIX constant instead of
  hardcoded "mnt/user-data/uploads" strings
- Eliminate TOCTOU pre-checks and double file read in installer — single
  ZipFile() open with exception handling replaces is_file() + is_zipfile()
  + ZipFile() sequence
- Add missing re-exports: ensure_uploads_dir in uploads/__init__.py,
  SkillAlreadyExistsError in skills/__init__.py
- Remove redundant .lower() on already-lowercase CONVERTIBLE_EXTENSIONS
- Hoist sandbox_uploads_dir(thread_id) before loop in uploads router

* fix: add input validation for thread_id and filename length

- Reject thread_id containing unsafe filesystem characters (only allow
  alphanumeric, hyphens, underscores, dots) — prevents 500 on inputs
  like <script> or shell metacharacters
- Reject filenames longer than 255 bytes (OS limit) in normalize_filename
- Gateway upload router maps ValueError to 400 for invalid thread_id

* fix: address PR review — symlink safety, input validation coverage, error ordering

- list_files_in_dir: use follow_symlinks=False to prevent symlink metadata
  leakage; check is_dir() instead of exists() for non-directory paths
- install_skill_from_archive: restore is_file() pre-check before extension
  validation so error messages match the documented exception contract
- validate_thread_id: move from ensure_uploads_dir to get_uploads_dir so
  all entry points (upload/list/delete) are protected
- delete_uploaded_file: catch ValueError from thread_id validation (was 500)
- requires_llm marker: also skip when OPENAI_API_KEY is unset
- e2e fixture: update TitleMiddleware exclusion comment (kept filtering —
  middleware triggers extra LLM calls that add non-determinism to tests)

* chore: revert uv.lock to main — no dependency changes in this PR

* fix: use monkeypatch for global config in e2e fixture to prevent test pollution

The e2e_env fixture was calling set_title_config() and
set_summarization_config() directly, which mutated global singletons
without automatic cleanup. When pytest ran test_client_e2e.py before
test_title_middleware_core_logic.py, the leaked enabled=False caused
5 title tests to fail in CI.

Switched to monkeypatch.setattr on the module-level private variables
so pytest restores the originals after each test.

* fix: address code review — URL encoding, API consistency, test isolation

- upload_artifact_url: percent-encode filename to handle spaces/#/?
- deduplicate_filename: mutate seen set in place (caller no longer
  needs manual .add() — less error-prone API)
- list_files_in_dir: document that size is int, enrich stringifies
- e2e fixture: monkeypatch _app_config instead of set_app_config()
  to prevent global singleton pollution (same pattern as title/summarization fix)
- _make_e2e_config: read LLM connection details from env vars so
  external contributors can override defaults
- Update tests to match new deduplicate_filename contract

* docs: rewrite RFC in English and add alternatives/breaking changes sections

* fix: address code review feedback on PR #1202

- Rename deduplicate_filename to claim_unique_filename to make
  the in-place set mutation explicit in the function name
- Replace PermissionError with PathTraversalError(ValueError) for
  path traversal detection — malformed input is 400, not 403

* fix: set _app_config_is_custom in e2e test fixture to prevent config.yaml lookup in CI

---------

Co-authored-by: greatmengqi <chenmengqi.0376@bytedance.com>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
Co-authored-by: DanielWalnut <45447813+hetaoBackend@users.noreply.github.com>
2026-03-25 16:28:33 +08:00
Ryanba 4c78188896 fix(gateway): remove generated markdown on upload delete (#1170)
* fix(gateway): remove generated markdown on upload delete

Keep thread upload storage consistent by deleting the generated markdown companion when the original convertible upload is removed.

Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-opencode)

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>

* Potential fix for pull request finding

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

---------

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
2026-03-18 16:31:26 +08:00
DanielWalnut 76803b826f refactor: split backend into harness (deerflow.*) and app (app.*) (#1131)
* refactor: extract shared utils to break harness→app cross-layer imports

Move _validate_skill_frontmatter to src/skills/validation.py and
CONVERTIBLE_EXTENSIONS + convert_file_to_markdown to src/utils/file_conversion.py.
This eliminates the two reverse dependencies from client.py (harness layer)
into gateway/routers/ (app layer), preparing for the harness/app package split.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* refactor: split backend/src into harness (deerflow.*) and app (app.*)

Physically split the monolithic backend/src/ package into two layers:

- **Harness** (`packages/harness/deerflow/`): publishable agent framework
  package with import prefix `deerflow.*`. Contains agents, sandbox, tools,
  models, MCP, skills, config, and all core infrastructure.

- **App** (`app/`): unpublished application code with import prefix `app.*`.
  Contains gateway (FastAPI REST API) and channels (IM integrations).

Key changes:
- Move 13 harness modules to packages/harness/deerflow/ via git mv
- Move gateway + channels to app/ via git mv
- Rename all imports: src.* → deerflow.* (harness) / app.* (app layer)
- Set up uv workspace with deerflow-harness as workspace member
- Update langgraph.json, config.example.yaml, all scripts, Docker files
- Add build-system (hatchling) to harness pyproject.toml
- Add PYTHONPATH=. to gateway startup commands for app.* resolution
- Update ruff.toml with known-first-party for import sorting
- Update all documentation to reflect new directory structure

Boundary rule enforced: harness code never imports from app.
All 429 tests pass. Lint clean.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* chore: add harness→app boundary check test and update docs

Add test_harness_boundary.py that scans all Python files in
packages/harness/deerflow/ and fails if any `from app.*` or
`import app.*` statement is found. This enforces the architectural
rule that the harness layer never depends on the app layer.

Update CLAUDE.md to document the harness/app split architecture,
import conventions, and the boundary enforcement test.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* feat: add config versioning with auto-upgrade on startup

When config.example.yaml schema changes, developers' local config.yaml
files can silently become outdated. This adds a config_version field and
auto-upgrade mechanism so breaking changes (like src.* → deerflow.*
renames) are applied automatically before services start.

- Add config_version: 1 to config.example.yaml
- Add startup version check warning in AppConfig.from_file()
- Add scripts/config-upgrade.sh with migration registry for value replacements
- Add `make config-upgrade` target
- Auto-run config-upgrade in serve.sh and start-daemon.sh before starting services
- Add config error hints in service failure messages

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix comments

* fix: update src.* import in test_sandbox_tools_security to deerflow.*

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: handle empty config and search parent dirs for config.example.yaml

Address Copilot review comments on PR #1131:
- Guard against yaml.safe_load() returning None for empty config files
- Search parent directories for config.example.yaml instead of only
  looking next to config.yaml, fixing detection in common setups

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: correct skills root path depth and config_version type coercion

- loader.py: fix get_skills_root_path() to use 5 parent levels (was 3)
  after harness split, file lives at packages/harness/deerflow/skills/
  so parent×3 resolved to backend/packages/harness/ instead of backend/
- app_config.py: coerce config_version to int() before comparison in
  _check_config_version() to prevent TypeError when YAML stores value
  as string (e.g. config_version: "1")
- tests: add regression tests for both fixes

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: update test imports from src.* to deerflow.*/app.* after harness refactor

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-14 22:55:52 +08:00
DanielWalnut 75b7302000 feat: add IM channels for Feishu, Slack, and Telegram (#1010)
* feat: add IM channels system for Feishu, Slack, and Telegram integration

Bridge external messaging platforms to DeerFlow via LangGraph Server with
async message bus, thread management, and per-channel configuration.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: address review comments on IM channels system

Fix topic_id handling in store remove/list_entries and manager commands,
correct Telegram reply threading, remove unused imports/variables, update
docstrings and docs to match implementation, and prevent config mutation.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* update skill creator

* fix im reply text

* fix comments

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Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-08 15:21:18 +08:00
Willem Jiang 8c6dd9e264 fix(uploads): persist thread uploads canonically and fail fast on upload errors (#943)
* fix(uploads): persist thread uploads canonically and fail fast on upload errors

 - write uploads to thread-scoped storage first to guarantee agent visibility
 - sync files to sandbox virtual path only for non-local sandboxes
 - fix markdown conversion flow to operate on canonical saved files and sync converted files when needed
 - prevent silent attachment upload failures in frontend submit flow (show error + abort submit)
 - add regression tests for local vs non-local upload behavior
 - update upload docs with thread-first persistence and troubleshooting notes

* Update frontend/src/core/threads/hooks.ts

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* fix(uploads): reject "." and ".." filenames in upload sanitization (#944)

* Initial plan

* fix(uploads): reject '.' and '..' filenames in upload sanitization

Co-authored-by: WillemJiang <219644+WillemJiang@users.noreply.github.com>

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Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: WillemJiang <219644+WillemJiang@users.noreply.github.com>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>

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Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <198982749+Copilot@users.noreply.github.com>
2026-03-01 15:35:30 +08:00