* feat: add citation/reference support to deep research reports (#1141)
- Enhance lead agent system prompt with mandatory citation requirements
after web_search/web_fetch tool usage
- Add citation examples and best practices to GitHub Deep Research skill
- Add citation hints to report template (Executive Summary, Key Analysis)
- Style regular markdown links in frontend for visual distinction
(color, underline, hover effect)
- Fix TitleMiddleware being registered when title generation is disabled
* fix: address PR review comments
- Revert TitleMiddleware conditional registration (agent.py) to avoid
sync/async incompatibility with DeerFlowClient
- Fix markdown link rendering: merge classNames instead of overwriting,
only set target=_blank for external http(s) URLs
- Remove unrelated package.json/pnpm-lock.yaml changes
* fix: use plain markdown links in Sources section for cleaner rendering
Inline citations in report body use [citation:Title](URL) for pill/badge style.
Sources section uses plain [Title](URL) for simple underlined link style.
* fix(frontend): render plain links as underlined text in artifact markdown
Only links with citation: prefix render as Badge pills.
Regular links in Sources section now render as underlined text links.
---------
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
* feat(upload): implement optimistic UI for file uploads and enhance message handling
* feat(middleware): enhance file handling by collecting historical uploads from directory
* feat(thread-title): update page title handling for new threads and improve loading state
* feat(uploads-middleware): enhance file extraction by verifying file existence in uploads directory
* feat(thread-stream): update file path reference to use virtual_path for uploads
* feat(tests): add core behaviour tests for UploadsMiddleware
* feat(tests): remove unused pytest import from test_uploads_middleware_core_logic.py
* feat: enhance file upload handling and localization support
- Update UploadsMiddleware to validate filenames more robustly.
- Modify MessageListItem to parse uploaded files from raw content for backward compatibility.
- Add localization for uploading messages in English and Chinese.
- Introduce parseUploadedFiles utility to extract uploaded files from message content.
* feat: add agent management functionality with creation, editing, and deletion
* feat: enhance agent creation and chat experience
- Added AgentWelcome component to display agent description on new thread creation.
- Improved agent name validation with availability check during agent creation.
- Updated NewAgentPage to handle agent creation flow more effectively, including enhanced error handling and user feedback.
- Refactored chat components to streamline message handling and improve user experience.
- Introduced new bootstrap skill for personalized onboarding conversations, including detailed conversation phases and a structured SOUL.md template.
- Updated localization files to reflect new features and error messages.
- General code cleanup and optimizations across various components and hooks.
* Refactor workspace layout and agent management components
- Updated WorkspaceLayout to use useLayoutEffect for sidebar state initialization.
- Removed unused AgentFormDialog and related edit functionality from AgentCard.
- Introduced ArtifactTrigger component to manage artifact visibility.
- Enhanced ChatBox to handle artifact selection and display.
- Improved message list rendering logic to avoid loading states.
- Updated localization files to remove deprecated keys and add new translations.
- Refined hooks for local settings and thread management to improve performance and clarity.
- Added temporal awareness guidelines to deep research skill documentation.
* feat: refactor chat components and introduce thread management hooks
* feat: improve artifact file detail preview logic and clean up console logs
* feat: refactor lead agent creation logic and improve logging details
* feat: validate agent name format and enhance error handling in agent setup
* feat: simplify thread search query by removing unnecessary metadata
* feat: update query key in useDeleteThread and useRenameThread for consistency
* feat: add isMock parameter to thread and artifact handling for improved testing
* fix: reorder import of setup_agent for consistency in builtins module
* feat: append mock parameter to thread links in CaseStudySection for testing purposes
* fix: update load_agent_soul calls to use cfg.name for improved clarity
* fix: update date format in apply_prompt_template for consistency
* feat: integrate isMock parameter into artifact content loading for enhanced testing
* docs: add license section to SKILL.md for clarity and attribution
* feat(agent): enhance model resolution and agent configuration handling
* chore: remove unused import of _resolve_model_name from agents
* feat(agent): remove unused field
* fix(agent): set default value for requested_model_name in _resolve_model_name function
* feat(agent): update get_available_tools call to handle optional agent_config and improve middleware function signature
---------
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
* feat: Add reasoning effort configuration support
* Add `reasoning_effort` parameter to model config and agent initialization
* Support reasoning effort levels (minimal/low/medium/high) for Doubao/GPT-5 models
* Add UI controls in input box for reasoning effort selection
* Update doubao-seed-1.8 example config with reasoning effort support
Fixes & Cleanup:
* Ensure UTF-8 encoding for file operations
* Remove unused imports
* fix: set reasoning_effort to None for unsupported models
* fix: unit test error
* Update frontend/src/components/workspace/input-box.tsx
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
---------
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
- Backend: add citation format to lead_agent and general_purpose prompts
- Add CitationLink component (Badge + HoverCard) for citation cards
- MarkdownContent: detect citation: prefix in link text, render CitationLink
- Message/artifact/subtask: use MarkdownContent or Streamdown with CitationLink
- message-list-item: pass img via components prop (remove isHuman/img)
- message-group, subtask-card: drop unused imports; fix import order (lint)
Co-authored-by: Cursor <cursoragent@cursor.com>
Citations:
- In shouldShowCitationLoading, treat any unreplaced [cite-N] in cleanContent
as show-loading (no body). Fixes Ultra and other modes when refs arrive
before the <citations> block in the stream.
- Single rule: hasUnreplacedCitationRefs(cleanContent) => true forces loading;
then isLoading && hasCitationsBlock(rawContent) for streaming indicator.
SSE end state:
- When stream finishes, SDK may set isLoading=false before client state has
the final message content, so UI stayed wrong until refresh.
- Store onFinish(state) as finalState in chat page; clear when stream starts.
- Pass messagesOverride={finalState.messages} to MessageList when not loading
so the list uses server-complete messages right after SSE ends (no refresh).
Chore:
- Stop tracking .githooks/pre-commit; add .githooks/ to .gitignore (local only).
Co-authored-by: Cursor <cursoragent@cursor.com>
---
fix(前端): 杜绝半成品引用，SSE 结束时展示正确状态
引用：
- shouldShowCitationLoading 中只要 cleanContent 仍含未替换的 [cite-N] 就
只显示加载、不渲染正文，解决流式时引用块未到就出现 [cite-1] 的问题。
- 规则：hasUnreplacedCitationRefs(cleanContent) 为真则一律显示加载；
此外 isLoading && hasCitationsBlock 用于流式时显示「正在整理引用」。
SSE 结束状态：
- 流结束时 SDK 可能先置 isLoading=false，客户端 messages 尚未包含
最终内容，导致需刷新才显示正确。
- 在对话页保存 onFinish(state) 为 finalState，流开始时清空。
- 非加载时向 MessageList 传入 messagesOverride={finalState.messages}，
列表在 SSE 结束后立即用服务端完整消息渲染，无需刷新。
杂项：
- 取消跟踪 .githooks/pre-commit，.gitignore 增加 .githooks/（仅本地）。
Citations:
- In shouldShowCitationLoading, treat any unreplaced [cite-N] in cleanContent
as show-loading (no body). Fixes Ultra and other modes when refs arrive
before the <citations> block in the stream.
- Single rule: hasUnreplacedCitationRefs(cleanContent) => true forces loading;
then isLoading && hasCitationsBlock(rawContent) for streaming indicator.
SSE end state:
- When stream finishes, SDK may set isLoading=false before client state has
the final message content, so UI stayed wrong until refresh.
- Store onFinish(state) as finalState in chat page; clear when stream starts.
- Pass messagesOverride={finalState.messages} to MessageList when not loading
so the list uses server-complete messages right after SSE ends (no refresh).
Chore:
- Stop tracking .githooks/pre-commit; add .githooks/ to .gitignore (local only).
Co-authored-by: Cursor <cursoragent@cursor.com>
---
fix(前端): 杜绝半成品引用，SSE 结束时展示正确状态
引用：
- shouldShowCitationLoading 中只要 cleanContent 仍含未替换的 [cite-N] 就
只显示加载、不渲染正文，解决流式时引用块未到就出现 [cite-1] 的问题。
- 规则：hasUnreplacedCitationRefs(cleanContent) 为真则一律显示加载；
此外 isLoading && hasCitationsBlock 用于流式时显示「正在整理引用」。
SSE 结束状态：
- 流结束时 SDK 可能先置 isLoading=false，客户端 messages 尚未包含
最终内容，导致需刷新才显示正确。
- 在对话页保存 onFinish(state) 为 finalState，流开始时清空。
- 非加载时向 MessageList 传入 messagesOverride={finalState.messages}，
列表在 SSE 结束后立即用服务端完整消息渲染，无需刷新。
杂项：
- 取消跟踪 .githooks/pre-commit，.gitignore 增加 .githooks/（仅本地）。
- Extract removeCitationsBlocks in utils, reuse in parseCitations and removeAllCitations
- Add hasCitationsBlock; isCitationsBlockIncomplete now uses it
- Add useParsedCitations hook (parseCitations + buildCitationMap) for message/artifact
- Add CitationAwareLink to unify link rendering (message-list-item + artifact-file-detail)
- Add getCleanContent helper; message-group uses it and useParsedCitations
- ArtifactFileDetail: single useParsedCitations, pass cleanContent/citationMap to Preview
- Stop exporting buildCitationMap and removeCitationsBlocks from citations index
- Remove duplicate MessageLink and inline link logic in artifact preview
Co-authored-by: Cursor <cursoragent@cursor.com>
- Extract removeCitationsBlocks in utils, reuse in parseCitations and removeAllCitations
- Add hasCitationsBlock; isCitationsBlockIncomplete now uses it
- Add useParsedCitations hook (parseCitations + buildCitationMap) for message/artifact
- Add CitationAwareLink to unify link rendering (message-list-item + artifact-file-detail)
- Add getCleanContent helper; message-group uses it and useParsedCitations
- ArtifactFileDetail: single useParsedCitations, pass cleanContent/citationMap to Preview
- Stop exporting buildCitationMap and removeCitationsBlocks from citations index
- Remove duplicate MessageLink and inline link logic in artifact preview
Co-authored-by: Cursor <cursoragent@cursor.com>
- About: use aboutMarkdown from about-content.ts instead of raw-loader for
about.md (fixes Turbopack 'Cannot find module raw-loader')
- Web search: remove Tooltip from web_search and web_fetch result links
- Citations: remove HoverCard from CitationLink so no hover popup on badges
Co-authored-by: Cursor <cursoragent@cursor.com>
- About: use aboutMarkdown from about-content.ts instead of raw-loader for
about.md (fixes Turbopack 'Cannot find module raw-loader')
- Web search: remove Tooltip from web_search and web_fetch result links
- Citations: remove HoverCard from CitationLink so no hover popup on badges
Co-authored-by: Cursor <cursoragent@cursor.com>
The reasoning content in message-group.tsx was not being processed
through parseCitations, causing raw <citations> blocks to be visible.
Now reasoning content is parsed to remove citations blocks.
Co-authored-by: Cursor <cursoragent@cursor.com>
The reasoning content in message-group.tsx was not being processed
through parseCitations, causing raw <citations> blocks to be visible.
Now reasoning content is parsed to remove citations blocks.
Co-authored-by: Cursor <cursoragent@cursor.com>
Revert streaming logic - only links that are actually in citationMap
should render as badges. This prevents project URLs and other regular
links from being incorrectly rendered as citation badges.
During streaming, links may initially appear as plain links until the
citations block is fully parsed, then they will update to badge style.
Co-authored-by: Cursor <cursoragent@cursor.com>
Revert streaming logic - only links that are actually in citationMap
should render as badges. This prevents project URLs and other regular
links from being incorrectly rendered as citation badges.
During streaming, links may initially appear as plain links until the
citations block is fully parsed, then they will update to badge style.
Co-authored-by: Cursor <cursoragent@cursor.com>
During streaming when citations are still loading (isLoadingCitations=true),
all external links should be rendered as badges since we don't know yet
which links are citations. After streaming completes, only links in
citationMap are rendered as badges.
Co-authored-by: Cursor <cursoragent@cursor.com>
During streaming when citations are still loading (isLoadingCitations=true),
all external links should be rendered as badges since we don't know yet
which links are citations. After streaming completes, only links in
citationMap are rendered as badges.
Co-authored-by: Cursor <cursoragent@cursor.com>
lailoo