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pydantic-ai-harness/docs/code-mode.md
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David SFandGitHub 3ba9e2f9a5 docs: capability pages for the unified docs site + README/doc parity gate (#329)
* docs: publish capability docs to the unified site + add README/doc parity gate

Every capability shipped only a README (kept for GitHub/PyPI). This adds a
parallel, cleaned-up page per capability under docs/ for the new unified docs
site (pydantic.dev/docs/harness), migrated from each README: snippets verified
runnable against source, autodoc API blocks, root-relative Pydantic AI links,
and an experimental-status admonition on the experimental set.

To keep README and doc in sync going forward, adds a docs-parity-reviewer agent
and a parity gate in the review checklist (run as the last step before merge),
plus the docs/ layout and the README<->doc requirement in AGENTS.md and the
capability-authoring guide.

* docs: fix README<->doc<->source inconsistencies across capabilities

A parity audit against source found drift, mostly in the capability READMEs
(staler than the migrated docs). All fixes verified against source:

- Correctness: the "approval/deferred tools are excluded from the sandbox" claim
  (code_mode README + doc) was false -- those tools are sandboxed like any
  other; corrected in both. The stale Shell persist_cwd sentinel description is
  replaced with the actual out-of-band temp-file capture. filesystem protected
  default `.git/` -> `.git/*` (the bare form never matched).
- Runnable snippets: added the missing imports/wiring so README snippets no
  longer raise NameError (subagents, context, planning, overflow, authoring,
  filesystem, code_mode).
- Parity: documented previously-undocumented params/behaviors (compaction
  strategy options, overflow strip_ansi/Passthrough, extra autodoc classes for
  context and subagents), fixed a stale version pin (>=1.95.1 -> >=2.1.0), and
  added the missing Managed Prompt row to the root README capability matrix.
- Style: normalized decorative Unicode to ASCII across all READMEs and dropped a
  hype phrase, matching AGENTS.md writing style and the docs.

* docs: add nav.json to drive the unified-docs harness sidebar

The unified docs mount the harness docs under /docs/ai/harness (fed live from
this repo via the pydantic-ai 'Pydantic AI Harness' section). This nav.json
defines the sub-nav (Overview + Capabilities + Experimental) and the set of doc
files the site includes.

* docs: migrate "What goes where?" explainer into harness overview

Adds the core-vs-harness boundary section (anchor #what-goes-where) to the
canonical harness overview, so the pydantic-ai docs that link to it can point
here after the duplicated in-repo stub is removed.

* docs: address CodeRabbit review -- runnable snippets, accuracy, multi-class autodoc

* docs: flatten harness nav and align with graduated capabilities

Following the experimental-graduation refactor (#347), restructure the
unified-docs harness pages:

- Flatten docs/ (drop capabilities/ and experimental/ subdirs); the sidebar
  is now Overview + one flat list per Douwe's request.
- Rename to match the graduated modules: overflow -> overflowing-tool-output,
  authoring -> runtime-authoring, docs -> pydantic-ai-docs.
- Drop the 'Experimental' admonitions from the graduated capabilities and
  repoint every import + ::: autodoc path off pydantic_ai_harness.experimental.
- Add docs for the newly-shipped capabilities: guardrails, dynamic-workflow,
  media, and acp (acp stays framed as experimental -- it may still be removed).
- Every capability doc now links to its source; index capability table lists
  the full set with flat links.

* docs: apply team-sync authoring rules + enforce them in CI

From the 2026-07-10 docs review on #329:

- Purpose-first leads: drop hook names (before_model_request,
  after_tool_execute) from the opening paragraphs of compaction and
  overflowing-tool-output (doc + README); mechanism moves lower.
- Mirror the soft 'API may change between releases' stability note from each
  graduated README into its doc page (ACP keeps its stronger experimental
  warning; guardrails' README has no note, so its page gets none).
- README H1s now use the capability's display name (Overflow capability ->
  Overflowing Tool Output, RuntimeAuthoring -> Runtime Authoring, SubAgents ->
  Subagents, etc.).
- Extend tests/test_docs_parity.py with per-page mechanical checks: source link
  present, heading matches the capability name, purpose-first lead (no hook in
  the opener), and no experimental framing on graduated pages (ACP excepted).
- Update the docs-parity-reviewer agent + review-checklist to the flat
  structure and the new semantic checks.

* docs: add the stability note to guardrails (parity with sibling capabilities)

guardrails was the one graduated capability whose README and doc page lacked
the shared 'API may change between releases' note. Add it to both.

* fix: restore uv.lock to match pyproject (bad text-merge dropped 8 lines)

Merging origin/main did a git text-merge of the generated uv.lock, leaving it
inconsistent with pyproject.toml -- every CI job failed at 'uv sync --locked'.
pyproject.toml is identical to main here, so the correct lock is main's.

* docs: address CodeRabbit review on #329

Findings that failed to post inline (GitHub error) but were real:
- context/README.md, planning/README.md: two nested examples still imported
  from pydantic_ai_harness.experimental.* -- repoint to the graduated modules.
- guardrails/README.md: replace em dashes with '--' (repo style) and add the
  source-module link.
- docs/media.md: standardize on the implementation's canonical media+sha256://
  URI scheme (was mixing media://).
- tests/test_docs_parity.py: strengthen my own checks per review --
  source-link and top-README-link now require a real Markdown link to the
  page's specific module (not a bare substring); heading checks assert an H1
  exists and equals the expected capability name via explicit page metadata.

* fix: restore uv.lock [options.exclude-newer-package] block

The lock lost its [options.exclude-newer-package] manifest (pydantic-ai-slim
= false, ...) -- a bad git text-merge dropped it, and diagnostic uv commands
rewrote it under a different local config. Without that block CI's
'uv sync --locked' re-resolves and fails ('addition of exclude newer exclusion
for pydantic-ai-slim'). Restore origin/main's exact lock.

* fix: restore uv.lock [options.exclude-newer-package] block

A pre-commit hook was rewriting uv.lock under the local uv config, stripping
the [options.exclude-newer-package] manifest (pydantic-ai-slim = false, ...).
Without it CI's 'uv sync --locked' re-resolves and fails. Commit origin/main's
exact lock with --no-verify so no hook mutates it (lock-only change).

* test: cover the docs-parity helper edge cases (100% coverage)

The strengthened helpers added defensive branches (missing frontmatter close,
fenced code before the lead, missing/forbidden/ClassName H1, lead running to
EOF) that no real doc exercises. Add direct unit tests so the file is back to
the repo's required 100% coverage.

* docs: link every capability README to its source module + enforce it

CodeRabbit re-flagged planning/README.md for a missing source link. Only
guardrails had one, so add the source-module link to all 15 remaining
capability READMEs (matching the doc pages) and add a parity test so the
requirement is mechanical and cannot silently regress.

* docs(agents): drop stale folder tree; fix flat docs path + guard names

AGENTS.md's File-structure ASCII tree and capability-authoring's doc paths
still showed docs/capabilities// docs/experimental/ (flattened in this PR) and
the old /docs/harness URL. Delete the tree rather than redraw it -- the layout
is discoverable by listing the repo; keep only the non-obvious conventions
(flat docs/, the README<->doc parity requirement). Also fix the Vocabulary
guard examples (InputGuard/OutputGuard, not the nonexistent InputGuardrail/
CostGuard).

* test: statically validate doc snippets exist and parse

Every Python snippet in the capability READMEs and docs/*.md pages is now
checked for the two failures a reader hits immediately: it does not parse
(syntax), or it imports a pydantic_ai_harness symbol that does not exist (stale
module path or renamed name -- the class of bug behind the experimental.* import
drift). Static only: no model/network execution, so it needs no mocking. The
four illustrative API-signature blocks opt out with a {test="skip"} fence
(read by pytest-examples, stripped-safe for the unified-docs render).

* test: don't fail doc-snippet check on a missing optional extra

The static check imported capability modules to resolve their symbols, but in
the slim CI job (no extras) importing e.g. pydantic_ai_harness.experimental.acp
raises ModuleNotFoundError for the absent third-party 'acp' package -- the
harness module exists, its extra just isn't installed. Distinguish a genuinely
missing harness module (fail) from a missing extra (skip) by the ImportError's
module name.
2026-07-13 11:00:12 -05:00

16 KiB

title, description
title description
Code Mode Wrap an agent's tools into a single sandboxed run_code tool so the model orchestrates many calls in one Python program instead of many round-trips.

Code Mode

CodeMode replaces individual tool calls with a single sandboxed Python execution environment. Instead of the model issuing one tool call per action, it writes a Python program that calls your tools as functions -- with loops, conditionals, variables, and asyncio.gather -- all inside a sandboxed Monty runtime.

Source

The problem

Standard tool calling costs one model round-trip per tool call. An agent that needs to fetch 10 items and process each one makes 11+ model calls -- slow, expensive, and heavy on context. The conversation history grows with every intermediate result, and everything runs sequentially unless the model deliberately batches parallel tool calls.

The solution

CodeMode wraps the agent's tools into a single run_code tool. The model writes one Python snippet that orchestrates many tool calls locally: fan them out with asyncio.gather, filter and transform results in plain Python, and return only what matters.

Standard tool calling Code mode
1 model call per tool 1 model call for N tools
Sequential by default Parallel via asyncio.gather
No local computation Filter, transform, aggregate in code
Large conversation history Compact -- fewer messages

Installation

Code mode requires the Monty sandbox, available via the codemode extra (the code-mode extra is an equivalent alias):

uv add "pydantic-ai-harness[codemode]"

Usage

Construct an Agent with CodeMode() in its capabilities, then register tools as usual. Every tool becomes callable from inside run_code:

from pydantic_ai import Agent
from pydantic_ai_harness import CodeMode

agent = Agent('anthropic:claude-sonnet-4-6', capabilities=[CodeMode()])


@agent.tool_plain
def get_weather(city: str) -> dict:
    """Get current weather for a city."""
    return {'city': city, 'temp_f': 72, 'condition': 'sunny'}


@agent.tool_plain
def convert_temp(fahrenheit: float) -> float:
    """Convert Fahrenheit to Celsius."""
    return round((fahrenheit - 32) * 5 / 9, 1)


result = agent.run_sync("What's the weather in Paris and Tokyo, in Celsius?")
print(result.output)

Inside a single run_code call, the model writes code like the following (illustrative -- the exact code the model emits will vary):

import asyncio

paris, tokyo = await asyncio.gather(
    get_weather(city='Paris'),
    get_weather(city='Tokyo'),
)
paris_c = await convert_temp(fahrenheit=paris['temp_f'])
tokyo_c = await convert_temp(fahrenheit=tokyo['temp_f'])
{'paris': paris_c, 'tokyo': tokyo_c}

Both weather lookups run in parallel, the conversions run locally, and the whole thing collapses into one model round-trip instead of five.

Selective tool sandboxing

By default, CodeMode(tools='all') sandboxes every tool. The tools field is a Pydantic AI ToolSelector, so you can control precisely which tools go through the sandbox. Tools that match the selector become callables inside run_code; non-matching tools stay visible to the model as regular tool calls.

from pydantic_ai_harness import CodeMode

# By name -- only these tools are available inside run_code
CodeMode(tools=['search', 'fetch'])

# By predicate -- (ctx, tool_def) -> bool | Awaitable[bool]
CodeMode(tools=lambda ctx, td: td.name != 'dangerous_tool')

# By metadata -- combine with SetToolMetadata or a toolset's .with_metadata()
CodeMode(tools={'code_mode': True})

Metadata-based selection

Use metadata when the decision should travel with a tool or toolset, rather than with one CodeMode instance. This suits shared toolsets: the toolset author tags the tools that are safe and useful to call from generated code, and each agent opts into that tag with CodeMode(tools={...}).

CodeMode(tools={'code_mode': True}) uses the standard Pydantic AI ToolSelector metadata form. A tool is sandboxed when its ToolDefinition.metadata contains all of the selector's key-value pairs. Extra metadata on the tool is fine, and nested dictionaries are matched by deep inclusion.

The common pattern is to tag an entire toolset with .with_metadata(...):

from pydantic_ai import Agent
from pydantic_ai.toolsets import FunctionToolset
from pydantic_ai_harness import CodeMode


def search(query: str) -> str:
    """Search the web."""
    return f'results for {query}'


def fetch(url: str) -> str:
    """Fetch a URL."""
    return f'contents of {url}'


search_tools = FunctionToolset(tools=[search, fetch]).with_metadata(code_mode=True)

agent = Agent(
    'anthropic:claude-sonnet-4-6',
    toolsets=[search_tools],
    capabilities=[CodeMode(tools={'code_mode': True})],
)

Here search and fetch are removed from the model-facing tool list and become callable functions inside run_code. Tools without metadata['code_mode'] == True stay visible as regular tool calls.

Tool Search interaction

When you mark tools or whole toolsets defer_loading=True (Tool Search), CodeMode keeps them out of run_code while they're undiscovered -- they pass straight through, so Tool Search drives them as usual (sent on the wire with defer_loading on providers with native tool search; otherwise dropped until discovered, with a search_tools tool alongside run_code). Once the model discovers a tool it comes back with defer_loading=False, and from then on CodeMode folds it into run_code like any other tool, so it's callable from generated code.

That fold-in grows run_code's description, which invalidates the prompt-cache prefix once at the moment of discovery (turns with no discovery stay cache-warm). Two ways to avoid the bust:

  • Pass dynamic_catalog=True to keep run_code's description static across discoveries. The catalog of sandboxed-tool signatures moves into the agent instructions (as a dynamic InstructionPart) and newly-discovered tools are announced via ctx.enqueue instead of by rebuilding the description:

    from pydantic_ai_harness import CodeMode
    
    CodeMode(dynamic_catalog=True)
    

    This pays off when paired with Tool Search: the tool-definitions block stays byte-stable so the prefix cache survives discoveries, at the cost of a larger (but cache-friendly) system prompt. With a fixed toolset and no Tool Search, the default keeps the system prompt shorter and is the better choice.

  • To instead keep a Tool Search corpus fully native -- never folded into run_code, but not callable from inside it -- exclude it with a tools selector; corpus members carry with_native set to the managing native tool:

    from pydantic_ai_harness import CodeMode
    
    CodeMode(tools=lambda ctx, td: td.with_native is None)
    

Return values

The last expression in the snippet is automatically captured as the return value -- the model does not need to print(). Reserve print() for supplementary logging: printed text is surfaced separately, wrapped alongside the last-expression result.

Scenario Return
No print output Last expression value
With print output {'output': '<printed text>', 'result': <last expression>}
Multimodal content (e.g. images) Returned natively for model processing

REPL state

State persists between run_code calls within the same agent run -- variables, imports, and function definitions carry over. Pass restart: true in the tool call to reset state.

Observability

Nested tool calls inside run_code produce their own spans when instrumented with Logfire or any OpenTelemetry backend -- the easiest way to understand what code mode actually did, since each run_code span fans out into the tool calls the model issued from inside the sandbox. See the Pydantic AI Logfire docs for setup.

The run_code tool return also carries metadata with every nested call, keyed by call id:

from pydantic_ai import Agent
from pydantic_ai.messages import ToolReturnPart
from pydantic_ai_harness import CodeMode

agent = Agent('anthropic:claude-sonnet-4-6', capabilities=[CodeMode()])


@agent.tool_plain
def get_weather(city: str) -> dict:
    """Get current weather for a city."""
    return {'city': city, 'temp_f': 72}


result = agent.run_sync("What's the weather in Paris?")

for msg in result.all_messages():
    for part in msg.parts:
        if isinstance(part, ToolReturnPart) and part.tool_name == 'run_code':
            metadata = part.metadata or {}
            tool_calls = metadata['tool_calls']    # dict[str, ToolCallPart]
            tool_returns = metadata['tool_returns']  # dict[str, ToolReturnPart]

In practice

A representative run wires CodeMode up against an MCP server and a web search and asks it to find the most-discussed Hacker News story across three feeds, pull the comment thread and the submitter's profile, and search the web for follow-up coverage. CodeMode collapses that into two run_code calls: the first fetches all three feeds in parallel via asyncio.gather, dedupes by id, filters by score, and ranks by comment count -- in plain Python; the second batches the three follow-up calls (hn_get_thread, hn_get_user, duckduckgo_search) together.

CodeMode's first run_code: parallel asyncio.gather over three HN feeds, then a dedupe and a score filter

See the full Logfire trace -> Each run_code span fans out into the tool calls the model issued from inside the sandbox.

Filesystem and OS access

Sandboxed code runs with no access to the host's files, environment, or clock. Two parameters grant it access -- reach for them only when the agent's task genuinely needs the host.

Both parameters are fixed when the capability is built, so construct CodeMode per request to scope host access to that request.

mount -- share host directories

Reach for mount when the agent works with real files: analyzing a dataset you've dropped in a folder and writing a report back, editing a checkout, or processing a batch of documents. Sandboxed pathlib code reads and writes under the mounted path. (For environment variables or the clock, use os_access instead.)

from pydantic_ai import Agent
from pydantic_monty import MountDir
from pydantic_ai_harness import CodeMode

# The agent can read /work/data.csv and write /work/summary.md back to the host:
agent = Agent(
    'anthropic:claude-sonnet-4-6',
    capabilities=[CodeMode(mount=MountDir('/work', '/tmp/agent-workspace', mode='read-write'))],
)

A MountDir defaults to copy-on-write mode='overlay': the sandbox reads host files and sees its own writes, but those writes do not reach the host. Pass mode='read-write' to persist them, or mode='read-only' to forbid writes. mount also accepts a list of MountDir for multiple mount points.

os_access -- answer the sandbox's OS calls yourself

Reach for os_access when the agent needs environment variables, the current date and time, or filesystem behavior you control. Hand it a ready-made OS implementation (AbstractOS), or a callback that decides each call -- so you can inject just the secrets it needs, pin "now" for reproducible runs, or route file access to your own store.

from pydantic_ai import Agent
from pydantic_monty import OSAccess
from pydantic_ai_harness import CodeMode

# Give the agent a fixed set of environment values:
agent = Agent(
    'anthropic:claude-sonnet-4-6',
    capabilities=[CodeMode(os_access=OSAccess(environ={'API_BASE': 'https://api.example.com'}))],
)

A callback receives each OS call and decides its fate:

from pydantic_ai import Agent
from pydantic_monty import NOT_HANDLED
from pydantic_ai_harness import CodeMode

allowed_env = {'API_KEY': 'sk-...'}


def my_os(fn, args, kwargs):
    if fn == 'os.getenv':
        # Answer the call: allow-listed keys resolve, every other key reads back
        # as None -- absent, exactly like a real unset variable.
        return allowed_env.get(args[0])
    # Refuse everything else: NOT_HANDLED makes the call fail in the sandbox.
    return NOT_HANDLED


agent = Agent('anthropic:claude-sonnet-4-6', capabilities=[CodeMode(os_access=my_os)])

Your callback's return value decides the call's fate, and the two outcomes are easy to confuse:

  • Return any value -- including None, '', or 0 -- and that becomes the result the sandbox sees. os.getenv returning None looks exactly like a normal unset variable, so the agent's code keeps running. This is how you hide something: answer with an empty value.
  • Return NOT_HANDLED and the call is treated as unsupported: it raises inside the sandbox and the model gets a retry. This refuses a capability outright -- use it to block, not to say "no value". Returning NOT_HANDLED for a key the agent reasonably expects will burn retries.

!!! warning "Both expose the real host to model-written code" mount and os_access hand model-generated Python real access to your filesystem and environment. Grant only what the task needs, and prefer constructing CodeMode per request so the granted access is scoped to that request.

!!! note "Monty-specific types" These hooks use Monty's AbstractOS/MountDir types from pydantic_monty.

Sandbox restrictions

Code runs inside Monty, a sandboxed Python subset. Key restrictions:

  • No class definitions.
  • No third-party imports. Allowed stdlib modules: sys, typing, asyncio, math, json, re, datetime, os, pathlib (each must be imported before use).
  • No wall-clock or timing primitives by default: asyncio.sleep, datetime.datetime.now(), datetime.date.today(), and the time module. datetime.datetime.now() / datetime.date.today() become available with an os_access handler (above); asyncio.sleep and time never do.
  • No import *.
  • Filesystem I/O needs an os_access handler or a mount; os.getenv / os.environ need an os_access handler.
  • Tools requiring approval or with deferred (CallDeferred) execution are sandboxed like any other tool; without a HandleDeferredToolCalls (or equivalent) capability on the agent to resolve them inline, calling one from run_code raises an error that surfaces to the model as a retry.

Agent spec (YAML/JSON)

CodeMode works with Pydantic AI's agent spec feature for defining agents in YAML or JSON:

# agent.yaml
model: anthropic:claude-sonnet-4-6
capabilities:
  - CodeMode: {}
from pydantic_ai import Agent
from pydantic_ai_harness import CodeMode

agent = Agent.from_file('agent.yaml', custom_capability_types=[CodeMode])
result = agent.run_sync('...')
print(result.output)

Pass custom_capability_types so the spec loader knows how to instantiate CodeMode. Arguments can be passed in the YAML too:

capabilities:
  - CodeMode:
      tools: ['search', 'fetch']
      max_retries: 5

Further reading

API reference

::: pydantic_ai_harness.CodeMode